G1541259


Basic Information

Item Value
gene id G1541259
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 34119875 ~ 34120592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1763832
gctctcaaagtgcttgataggaagcccaatagccatcatcattgtcacatccttagaaagcatgagctcttgagttgggaaaatcttgtgcaatacaccgacgcatgtcttgtattcaagatccttaatggcctggctccccctccactcaatatttttgttaaacagaaaacccagacatatggcagcagatccacaaggtctgccatgagaggtgactgtatagttcccctaaggaaaagcacctttagtaaatctgcattctctgtgagagcttcccatgtctggaatacactgccatcagacacacataactgcaccacatatcacactttcacaaaatgcttgaagacatggctaaaggtcaatcagatttgtgaacatggtccctagctgtgtgttgccgctttccatgttgtctgttgtctgtagcttgtgaggtgtggaaacactgttgcttttatgaattttgtcttgctgctttttgttttatgttgctctgtctgtatgctacgtcttgcttgtcctatgttgctctgtctgtatgctatgtcttgcttgtcctatgttgctatgtcttgcttgttctatgctgctattgtctatattgtaattgtttttaataacctgcccagggactgcggttgaaaattagccggctggctaaaaccgtcacttttactgaaacgttgattaatgtgcactgtccctgtaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1763832 True 718 lncRNA 0.42 1 34119875 34120592

Neighbor

gene id symbol gene type direction distance location
lrp12 lrp12 coding downstream 252444 33828341 ~ 33867431 (-)
vps72a vps72 coding downstream 306574 33783934 ~ 33813301 (-)
LOC110496051 LOC106588219 coding downstream 373090 33697163 ~ 33746785 (-)
LOC110496050 csnk2b coding downstream 423966 33692392 ~ 33695909 (-)
LOC110496049 LOC106588217 coding downstream 445571 33657641 ~ 33674304 (-)
gdf6b gdf6 coding upstream 58441 34179033 ~ 34183891 (-)
LOC118940975 LOC106611608 coding upstream 114796 34235388 ~ 34237566 (-)
fbxl6 fbxl6 coding upstream 474639 34595231 ~ 34619367 (-)
nfatc1 LOC106588230 coding upstream 524524 34645116 ~ 34704821 (-)
atp9b atp9b coding upstream 617235 34735374 ~ 34794929 (-)
G1541248 NA non-coding downstream 1422 34118068 ~ 34118453 (-)
G1541230 NA non-coding downstream 39741 34079413 ~ 34080134 (-)
G1541225 NA non-coding downstream 49691 34069967 ~ 34070184 (-)
G1541207 NA non-coding downstream 86656 34031497 ~ 34033219 (-)
G1541115 NA non-coding downstream 180872 33875250 ~ 33939003 (-)
G1541260 NA non-coding upstream 57 34120649 ~ 34121034 (-)
G1541263 NA non-coding upstream 1027 34121619 ~ 34121872 (-)
G1541267 NA non-coding upstream 4631 34125223 ~ 34125508 (-)
G1541269 NA non-coding upstream 5202 34125794 ~ 34126012 (-)
G1541271 NA non-coding upstream 5555 34126147 ~ 34126434 (-)
LOC110496048 LOC106588215 other downstream 508982 33602474 ~ 33610948 (-)
G1540473 LOC106581475 other downstream 728123 33391339 ~ 33391752 (-)
G1540148 NA other downstream 1183306 32899578 ~ 32936569 (-)
G1539348 NA other downstream 1557755 32561726 ~ 32562120 (-)
G1541318 NA other upstream 41335 34161927 ~ 34162458 (-)
G1542988 sast other upstream 1017045 35137637 ~ 35138554 (-)
LOC110496081 LOC106588241 other upstream 1054714 35151351 ~ 35203984 (-)
LOC110496085 NA other upstream 1226303 35346895 ~ 35351655 (-)

Expression


Co-expression Network