G1541268


Basic Information

Item Value
gene id G1541268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 34125670 ~ 34125991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1763841
ggttaaataaaggagaaataaaaaatacaaataaacaccACACAGTATAAAAGCAGCTCTGTAAGACGAGTCTTTTACCTCATGATTAACATTTTGATCACTCATTTGCCAATCGTAACATTATGGCTATGAATTTGCACAGTTAAAATGTTGAAGTGCATTTGCACAGCTCTCTCGTGTGTTATTCCTTGAAAGACATGAAACCTGACCTGCATCACAAGTCTGGCTGTTTTGCTTCAAAATGTGTGGCACCTTTTTATGGAAGAGTCTTACTTCCTGTGTGAAACAGCCATAAGTAGGAGACATTAAAATGAAATAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1763841 True 322 lncRNA 0.36 1 34125670 34125991

Neighbor

gene id symbol gene type direction distance location
ints8 ints8 coding upstream 9388 34092247 ~ 34116282 (+)
LOC110496056 dpy19l4 coding upstream 37110 34080108 ~ 34088560 (+)
LOC110496055 LOC106588221 coding upstream 65710 33938682 ~ 34059960 (+)
LOC110496043 LOC106588212 coding upstream 588101 33535229 ~ 33537569 (+)
LOC118941241 NA coding upstream 613711 33511830 ~ 33511959 (+)
LOC110496058 LOC106588349 coding downstream 1201 34127192 ~ 34133734 (+)
trhrb LOC106588145 coding downstream 135321 34261312 ~ 34265470 (+)
LOC110496061 LOC106588154 coding downstream 171193 34297184 ~ 34300652 (+)
pleca LOC100194709 coding downstream 250105 34376096 ~ 34579125 (+)
LOC110496064 NA coding downstream 348556 34474547 ~ 34482054 (+)
G1541243 NA non-coding upstream 4693 34120716 ~ 34120977 (+)
G1540994 NA non-coding upstream 50089 34075128 ~ 34075581 (+)
G1540976 NA non-coding upstream 79990 34043133 ~ 34045680 (+)
G1540967 NA non-coding upstream 94462 34030868 ~ 34031208 (+)
G1540886 NA non-coding upstream 217042 33908231 ~ 33908628 (+)
G1541270 NA non-coding downstream 235 34126226 ~ 34126432 (+)
G1541278 NA non-coding downstream 8131 34134122 ~ 34134806 (+)
G1541300 NA non-coding downstream 21607 34147598 ~ 34147846 (+)
G1541304 NA non-coding downstream 25442 34151433 ~ 34152312 (+)
G1540996 NA other upstream 46596 34078718 ~ 34079074 (+)
G1540551 NA other upstream 634549 33489337 ~ 33491121 (+)
LOC110496797 LOC106570068 other upstream 667246 33455560 ~ 33458964 (+)
G1539671 LOC106582599 other upstream 1065813 33058990 ~ 33059857 (+)
mbpa LOC106588233 other downstream 757523 34883492 ~ 34898413 (+)
G1541989 NA other downstream 1156612 35282603 ~ 35283706 (+)
G1542037 LOC106588244 other downstream 1249253 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 1275846 35400723 ~ 35481348 (+)

Expression


Co-expression Network