G1541269



Basic Information


Item Value
gene id G1541269
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 34125794 ~ 34126012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1763842
CAGGGCGCTGGTAGCCAACTTCTTCTATTTCATTTTAATGTCTCCTACTTATGGCTGTTTCACACAGGAAGTAAGACTCTTCCATAAAAAGGTGCCACACATTTTGAAGCAAAACAGCCAGACTTGTGATGCAGGTCAGGTTTCATGTCTTTCAAGGAATAACACACGAGAGAGCTGTGCAAATGCACTTCAACATTTTAACTGTGCAAATTCATAGCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1763842 True 219 lncRNA 0.42 1 34125794 34126012

Neighbor


gene id symbol gene type direction distance location
lrp12 lrp12 coding downstream 258363 33828341 ~ 33867431 (-)
vps72a vps72 coding downstream 312493 33783934 ~ 33813301 (-)
LOC110496051 LOC106588219 coding downstream 379009 33697163 ~ 33746785 (-)
LOC110496050 csnk2b coding downstream 429885 33692392 ~ 33695909 (-)
LOC110496049 LOC106588217 coding downstream 451490 33657641 ~ 33674304 (-)
gdf6b gdf6 coding upstream 53021 34179033 ~ 34183891 (-)
LOC118940975 LOC106611608 coding upstream 109376 34235388 ~ 34237566 (-)
fbxl6 fbxl6 coding upstream 469219 34595231 ~ 34619367 (-)
nfatc1 LOC106588230 coding upstream 519104 34645116 ~ 34704821 (-)
atp9b atp9b coding upstream 611815 34735374 ~ 34794929 (-)
G1541267 NA non-coding downstream 286 34125223 ~ 34125508 (-)
G1541263 NA non-coding downstream 3922 34121619 ~ 34121872 (-)
G1541260 NA non-coding downstream 4760 34120649 ~ 34121034 (-)
G1541259 NA non-coding downstream 5202 34119875 ~ 34120592 (-)
G1541248 NA non-coding downstream 7341 34118068 ~ 34118453 (-)
G1541271 NA non-coding upstream 135 34126147 ~ 34126434 (-)
G1541283 NA non-coding upstream 10229 34136241 ~ 34136448 (-)
G1541295 NA non-coding upstream 16585 34142597 ~ 34142936 (-)
G1541308 NA non-coding upstream 25900 34151912 ~ 34155453 (-)
G1541313 NA non-coding upstream 33705 34159717 ~ 34159964 (-)
LOC110496048 LOC106588215 other downstream 514901 33602474 ~ 33610948 (-)
G1540473 LOC106581475 other downstream 734042 33391339 ~ 33391752 (-)
G1540148 NA other downstream 1189225 32899578 ~ 32936569 (-)
G1539348 NA other downstream 1563674 32561726 ~ 32562120 (-)
G1541318 NA other upstream 35915 34161927 ~ 34162458 (-)
G1542988 sast other upstream 1011625 35137637 ~ 35138554 (-)
LOC110496081 LOC106588241 other upstream 1049294 35151351 ~ 35203984 (-)
LOC110496085 NA other upstream 1220883 35346895 ~ 35351655 (-)

Expression



Co-expression Network