Gene
RNA
| Item | Value |
|---|---|
| gene id | G1541271 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34126147 ~ 34126434 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763844 | True | 288 | lncRNA | 0.39 | 1 | 34126147 | 34126434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrp12 | lrp12 | coding | downstream | 258716 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 312846 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 379362 | 33697163 ~ 33746785 (-) |
| LOC110496050 | csnk2b | coding | downstream | 430238 | 33692392 ~ 33695909 (-) |
| LOC110496049 | LOC106588217 | coding | downstream | 451843 | 33657641 ~ 33674304 (-) |
| gdf6b | gdf6 | coding | upstream | 52599 | 34179033 ~ 34183891 (-) |
| LOC118940975 | LOC106611608 | coding | upstream | 108954 | 34235388 ~ 34237566 (-) |
| fbxl6 | fbxl6 | coding | upstream | 468797 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 518682 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 611393 | 34735374 ~ 34794929 (-) |
| G1541269 | NA | non-coding | downstream | 135 | 34125794 ~ 34126012 (-) |
| G1541267 | NA | non-coding | downstream | 639 | 34125223 ~ 34125508 (-) |
| G1541263 | NA | non-coding | downstream | 4275 | 34121619 ~ 34121872 (-) |
| G1541260 | NA | non-coding | downstream | 5113 | 34120649 ~ 34121034 (-) |
| G1541259 | NA | non-coding | downstream | 5555 | 34119875 ~ 34120592 (-) |
| G1541283 | NA | non-coding | upstream | 9807 | 34136241 ~ 34136448 (-) |
| G1541295 | NA | non-coding | upstream | 16163 | 34142597 ~ 34142936 (-) |
| G1541308 | NA | non-coding | upstream | 25478 | 34151912 ~ 34155453 (-) |
| G1541313 | NA | non-coding | upstream | 33283 | 34159717 ~ 34159964 (-) |
| G1541334 | NA | non-coding | upstream | 45008 | 34171442 ~ 34171758 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 515254 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 734395 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1189578 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 1564027 | 32561726 ~ 32562120 (-) |
| G1541318 | NA | other | upstream | 35493 | 34161927 ~ 34162458 (-) |
| G1542988 | sast | other | upstream | 1011203 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 1048872 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 1220461 | 35346895 ~ 35351655 (-) |
