G1541270


Basic Information

Item Value
gene id G1541270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 34126226 ~ 34126432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1763843
CGTGTTTCCAAGTGTTCAAAGTAGAAATCAAATCTTACACAAAATATATTGGACAATTAAATGTGAAGTAATGCTAAAAACAACAAGCAGTCAATTATTCGTGGACTGTGCTAGACATGGACATGGGAGATGTTTGGCTGCTTGGATTGGCTGAAGCTTAATGATTTTCAACATCAAGTGACAGGTTTAGGCATAGGGTTAGCCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1763843 True 207 lncRNA 0.37 1 34126226 34126432

Neighbor

gene id symbol gene type direction distance location
ints8 ints8 coding upstream 9944 34092247 ~ 34116282 (+)
LOC110496056 dpy19l4 coding upstream 37666 34080108 ~ 34088560 (+)
LOC110496055 LOC106588221 coding upstream 66266 33938682 ~ 34059960 (+)
LOC110496043 LOC106588212 coding upstream 588657 33535229 ~ 33537569 (+)
LOC118941241 NA coding upstream 614267 33511830 ~ 33511959 (+)
LOC110496058 LOC106588349 coding downstream 760 34127192 ~ 34133734 (+)
trhrb LOC106588145 coding downstream 134880 34261312 ~ 34265470 (+)
LOC110496061 LOC106588154 coding downstream 170752 34297184 ~ 34300652 (+)
pleca LOC100194709 coding downstream 249664 34376096 ~ 34579125 (+)
LOC110496064 NA coding downstream 348115 34474547 ~ 34482054 (+)
G1541268 NA non-coding upstream 235 34125670 ~ 34125991 (+)
G1541243 NA non-coding upstream 5249 34120716 ~ 34120977 (+)
G1540994 NA non-coding upstream 50645 34075128 ~ 34075581 (+)
G1540976 NA non-coding upstream 80546 34043133 ~ 34045680 (+)
G1540967 NA non-coding upstream 95018 34030868 ~ 34031208 (+)
G1541278 NA non-coding downstream 7690 34134122 ~ 34134806 (+)
G1541300 NA non-coding downstream 21166 34147598 ~ 34147846 (+)
G1541304 NA non-coding downstream 25001 34151433 ~ 34152312 (+)
G1541344 NA non-coding downstream 51858 34178290 ~ 34178506 (+)
G1540996 NA other upstream 47152 34078718 ~ 34079074 (+)
G1540551 NA other upstream 635105 33489337 ~ 33491121 (+)
LOC110496797 LOC106570068 other upstream 667802 33455560 ~ 33458964 (+)
G1539671 LOC106582599 other upstream 1066369 33058990 ~ 33059857 (+)
mbpa LOC106588233 other downstream 757082 34883492 ~ 34898413 (+)
G1541989 NA other downstream 1156171 35282603 ~ 35283706 (+)
G1542037 LOC106588244 other downstream 1248812 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 1275405 35400723 ~ 35481348 (+)

Expression


Co-expression Network