Gene
RNA
| Item | Value |
|---|---|
| gene id | G1541313 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34159717 ~ 34159964 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763891 | True | 248 | lncRNA | 0.39 | 1 | 34159717 | 34159964 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrp12 | lrp12 | coding | downstream | 292286 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 346416 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 412932 | 33697163 ~ 33746785 (-) |
| LOC110496050 | csnk2b | coding | downstream | 463808 | 33692392 ~ 33695909 (-) |
| LOC110496049 | LOC106588217 | coding | downstream | 485413 | 33657641 ~ 33674304 (-) |
| gdf6b | gdf6 | coding | upstream | 19069 | 34179033 ~ 34183891 (-) |
| LOC118940975 | LOC106611608 | coding | upstream | 75424 | 34235388 ~ 34237566 (-) |
| fbxl6 | fbxl6 | coding | upstream | 435267 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 485152 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 577863 | 34735374 ~ 34794929 (-) |
| G1541308 | NA | non-coding | downstream | 4264 | 34151912 ~ 34155453 (-) |
| G1541295 | NA | non-coding | downstream | 16781 | 34142597 ~ 34142936 (-) |
| G1541283 | NA | non-coding | downstream | 23269 | 34136241 ~ 34136448 (-) |
| G1541271 | NA | non-coding | downstream | 33283 | 34126147 ~ 34126434 (-) |
| G1541269 | NA | non-coding | downstream | 33705 | 34125794 ~ 34126012 (-) |
| G1541334 | NA | non-coding | upstream | 11478 | 34171442 ~ 34171758 (-) |
| G1541337 | NA | non-coding | upstream | 13547 | 34173511 ~ 34173735 (-) |
| G1542514 | NA | non-coding | upstream | 139997 | 34299961 ~ 34300868 (-) |
| G1542543 | NA | non-coding | upstream | 198591 | 34358555 ~ 34363965 (-) |
| G1542566 | NA | non-coding | upstream | 242600 | 34402564 ~ 34402790 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 548824 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 767965 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1223148 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 1597597 | 32561726 ~ 32562120 (-) |
| G1541318 | NA | other | upstream | 1963 | 34161927 ~ 34162458 (-) |
| G1542988 | sast | other | upstream | 977673 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 1015342 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 1186931 | 35346895 ~ 35351655 (-) |
