Gene
RNA
| Item | Value |
|---|---|
| gene id | G1541334 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34171442 ~ 34171758 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1763913 | True | 317 | lncRNA | 0.41 | 1 | 34171442 | 34171758 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrp12 | lrp12 | coding | downstream | 304011 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 358141 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 424657 | 33697163 ~ 33746785 (-) |
| LOC110496050 | csnk2b | coding | downstream | 475533 | 33692392 ~ 33695909 (-) |
| LOC110496049 | LOC106588217 | coding | downstream | 497138 | 33657641 ~ 33674304 (-) |
| gdf6b | gdf6 | coding | upstream | 7275 | 34179033 ~ 34183891 (-) |
| LOC118940975 | LOC106611608 | coding | upstream | 63630 | 34235388 ~ 34237566 (-) |
| fbxl6 | fbxl6 | coding | upstream | 423473 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 473358 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 566069 | 34735374 ~ 34794929 (-) |
| G1541313 | NA | non-coding | downstream | 11478 | 34159717 ~ 34159964 (-) |
| G1541308 | NA | non-coding | downstream | 15989 | 34151912 ~ 34155453 (-) |
| G1541295 | NA | non-coding | downstream | 28506 | 34142597 ~ 34142936 (-) |
| G1541283 | NA | non-coding | downstream | 34994 | 34136241 ~ 34136448 (-) |
| G1541271 | NA | non-coding | downstream | 45008 | 34126147 ~ 34126434 (-) |
| G1541337 | NA | non-coding | upstream | 1753 | 34173511 ~ 34173735 (-) |
| G1542514 | NA | non-coding | upstream | 128203 | 34299961 ~ 34300868 (-) |
| G1542543 | NA | non-coding | upstream | 186797 | 34358555 ~ 34363965 (-) |
| G1542566 | NA | non-coding | upstream | 230806 | 34402564 ~ 34402790 (-) |
| G1542567 | NA | non-coding | upstream | 231288 | 34403046 ~ 34403265 (-) |
| G1541318 | NA | other | downstream | 8984 | 34161927 ~ 34162458 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 560549 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 779690 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1234873 | 32899578 ~ 32936569 (-) |
| G1542988 | sast | other | upstream | 965879 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 1003548 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 1175137 | 35346895 ~ 35351655 (-) |
| G1543128 | LOC106588245 | other | upstream | 1280860 | 35452618 ~ 35504157 (-) |
