Gene
RNA
| Item | Value |
|---|---|
| gene id | G1541496 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34306850 ~ 34311736 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1764081 | True | 234 | lncRNA | 0.44 | 2 | 34306850 | 34311736 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496061 | LOC106588154 | coding | upstream | 6198 | 34297184 ~ 34300652 (+) |
| trhrb | LOC106588145 | coding | upstream | 41380 | 34261312 ~ 34265470 (+) |
| LOC110496058 | LOC106588349 | coding | upstream | 173116 | 34127192 ~ 34133734 (+) |
| ints8 | ints8 | coding | upstream | 190568 | 34092247 ~ 34116282 (+) |
| LOC110496056 | dpy19l4 | coding | upstream | 218290 | 34080108 ~ 34088560 (+) |
| pleca | LOC100194709 | coding | downstream | 64360 | 34376096 ~ 34579125 (+) |
| LOC110496064 | NA | coding | downstream | 162811 | 34474547 ~ 34482054 (+) |
| LOC110496065 | LOC106588226 | coding | downstream | 306818 | 34618554 ~ 34624236 (+) |
| LOC110496068 | slc52a2 | coding | downstream | 315720 | 34627456 ~ 34632957 (+) |
| LOC110496067 | LOC106588229 | coding | downstream | 321490 | 34633226 ~ 34640621 (+) |
| G1541404 | NA | non-coding | upstream | 16428 | 34217282 ~ 34290422 (+) |
| G1541344 | NA | non-coding | upstream | 128344 | 34178290 ~ 34178506 (+) |
| G1541304 | NA | non-coding | upstream | 154538 | 34151433 ~ 34152312 (+) |
| G1541300 | NA | non-coding | upstream | 159004 | 34147598 ~ 34147846 (+) |
| G1541610 | NA | non-coding | downstream | 245891 | 34557627 ~ 34558111 (+) |
| G1541643 | NA | non-coding | downstream | 314741 | 34626477 ~ 34626974 (+) |
| G1541644 | NA | non-coding | downstream | 331322 | 34643058 ~ 34643288 (+) |
| G1540996 | NA | other | upstream | 227776 | 34078718 ~ 34079074 (+) |
| LOC110496043 | LOC106588212 | other | upstream | 769286 | 33535229 ~ 33537569 (+) |
| G1540551 | NA | other | upstream | 815729 | 33489337 ~ 33491121 (+) |
| LOC110496797 | LOC106570068 | other | upstream | 848426 | 33455560 ~ 33458964 (+) |
| mbpa | LOC106588233 | other | downstream | 571778 | 34883492 ~ 34898413 (+) |
| G1541989 | NA | other | downstream | 970867 | 35282603 ~ 35283706 (+) |
| G1542037 | LOC106588244 | other | downstream | 1063508 | 35373871 ~ 35386463 (+) |
| G1542052 | LOC106588245 | other | downstream | 1090101 | 35400723 ~ 35481348 (+) |
| G1542051 | LOC106588245 | other | downstream | 1167099 | 35478835 ~ 35502933 (+) |
