Gene
RNA
| Item | Value |
|---|---|
| gene id | G1542567 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34403046 ~ 34403265 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1765326 | True | 220 | lncRNA | 0.36 | 1 | 34403046 | 34403265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940975 | LOC106611608 | coding | downstream | 165480 | 34235388 ~ 34237566 (-) |
| gdf6b | gdf6 | coding | downstream | 219155 | 34179033 ~ 34183891 (-) |
| lrp12 | lrp12 | coding | downstream | 535615 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 589745 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 656261 | 33697163 ~ 33746785 (-) |
| fbxl6 | fbxl6 | coding | upstream | 191966 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 241851 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 334562 | 34735374 ~ 34794929 (-) |
| sall3b | LOC106588232 | coding | upstream | 392129 | 34795394 ~ 34808500 (-) |
| zbtb22a | LOC106588234 | coding | upstream | 503858 | 34906715 ~ 34923956 (-) |
| G1542566 | NA | non-coding | downstream | 256 | 34402564 ~ 34402790 (-) |
| G1542543 | NA | non-coding | downstream | 39081 | 34358555 ~ 34363965 (-) |
| G1542514 | NA | non-coding | downstream | 102178 | 34299961 ~ 34300868 (-) |
| G1541337 | NA | non-coding | downstream | 229311 | 34173511 ~ 34173735 (-) |
| G1541334 | NA | non-coding | downstream | 231288 | 34171442 ~ 34171758 (-) |
| G1542574 | NA | non-coding | upstream | 8906 | 34412171 ~ 34412443 (-) |
| G1542583 | NA | non-coding | upstream | 22683 | 34425948 ~ 34426169 (-) |
| G1542584 | NA | non-coding | upstream | 23230 | 34426495 ~ 34426712 (-) |
| G1542585 | NA | non-coding | upstream | 23911 | 34427176 ~ 34427396 (-) |
| G1542587 | NA | non-coding | upstream | 25761 | 34429026 ~ 34470929 (-) |
| G1541318 | NA | other | downstream | 240588 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 728815 | 33657641 ~ 33674304 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 792153 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 1011294 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1466477 | 32899578 ~ 32936569 (-) |
| G1542988 | sast | other | upstream | 734372 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 772041 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 943630 | 35346895 ~ 35351655 (-) |
| G1543128 | LOC106588245 | other | upstream | 1049353 | 35452618 ~ 35504157 (-) |
