Gene
RNA
| Item | Value |
|---|---|
| gene id | G1542583 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34425948 ~ 34426169 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1765342 | True | 222 | lncRNA | 0.39 | 1 | 34425948 | 34426169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940975 | LOC106611608 | coding | downstream | 188382 | 34235388 ~ 34237566 (-) |
| gdf6b | gdf6 | coding | downstream | 242057 | 34179033 ~ 34183891 (-) |
| lrp12 | lrp12 | coding | downstream | 558517 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 612647 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 679163 | 33697163 ~ 33746785 (-) |
| fbxl6 | fbxl6 | coding | upstream | 169062 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 218947 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 311658 | 34735374 ~ 34794929 (-) |
| sall3b | LOC106588232 | coding | upstream | 369225 | 34795394 ~ 34808500 (-) |
| zbtb22a | LOC106588234 | coding | upstream | 480954 | 34906715 ~ 34923956 (-) |
| G1542574 | NA | non-coding | downstream | 13505 | 34412171 ~ 34412443 (-) |
| G1542567 | NA | non-coding | downstream | 22683 | 34403046 ~ 34403265 (-) |
| G1542566 | NA | non-coding | downstream | 23158 | 34402564 ~ 34402790 (-) |
| G1542543 | NA | non-coding | downstream | 61983 | 34358555 ~ 34363965 (-) |
| G1542514 | NA | non-coding | downstream | 125080 | 34299961 ~ 34300868 (-) |
| G1542584 | NA | non-coding | upstream | 326 | 34426495 ~ 34426712 (-) |
| G1542585 | NA | non-coding | upstream | 1007 | 34427176 ~ 34427396 (-) |
| G1542587 | NA | non-coding | upstream | 2857 | 34429026 ~ 34470929 (-) |
| G1542628 | NA | non-coding | upstream | 148584 | 34574753 ~ 34579122 (-) |
| G1542698 | NA | non-coding | upstream | 159661 | 34585830 ~ 34586069 (-) |
| G1541318 | NA | other | downstream | 263490 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 751717 | 33657641 ~ 33674304 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 815055 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 1034196 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1489379 | 32899578 ~ 32936569 (-) |
| G1542988 | sast | other | upstream | 711468 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 749137 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 920726 | 35346895 ~ 35351655 (-) |
| G1543128 | LOC106588245 | other | upstream | 1026449 | 35452618 ~ 35504157 (-) |
