Gene
RNA
| Item | Value |
|---|---|
| gene id | G1542698 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34585830 ~ 34586069 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1765462 | True | 240 | lncRNA | 0.35 | 1 | 34585830 | 34586069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940975 | LOC106611608 | coding | downstream | 348264 | 34235388 ~ 34237566 (-) |
| gdf6b | gdf6 | coding | downstream | 401939 | 34179033 ~ 34183891 (-) |
| lrp12 | lrp12 | coding | downstream | 718399 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 772529 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 839045 | 33697163 ~ 33746785 (-) |
| fbxl6 | fbxl6 | coding | upstream | 9162 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 59047 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 151758 | 34735374 ~ 34794929 (-) |
| sall3b | LOC106588232 | coding | upstream | 209325 | 34795394 ~ 34808500 (-) |
| zbtb22a | LOC106588234 | coding | upstream | 321054 | 34906715 ~ 34923956 (-) |
| G1542628 | NA | non-coding | downstream | 6708 | 34574753 ~ 34579122 (-) |
| G1542587 | NA | non-coding | downstream | 114901 | 34429026 ~ 34470929 (-) |
| G1542585 | NA | non-coding | downstream | 158434 | 34427176 ~ 34427396 (-) |
| G1542584 | NA | non-coding | downstream | 159118 | 34426495 ~ 34426712 (-) |
| G1542583 | NA | non-coding | downstream | 159661 | 34425948 ~ 34426169 (-) |
| G1542701 | NA | non-coding | upstream | 2698 | 34588767 ~ 34589016 (-) |
| G1542702 | NA | non-coding | upstream | 3017 | 34589086 ~ 34589447 (-) |
| G1542706 | NA | non-coding | upstream | 5310 | 34591379 ~ 34591585 (-) |
| G1542714 | NA | non-coding | upstream | 38915 | 34624984 ~ 34625603 (-) |
| G1542717 | NA | non-coding | upstream | 47268 | 34633337 ~ 34634208 (-) |
| G1541318 | NA | other | downstream | 423372 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 911599 | 33657641 ~ 33674304 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 974937 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 1194078 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1649261 | 32899578 ~ 32936569 (-) |
| G1542988 | sast | other | upstream | 551568 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 589237 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 760826 | 35346895 ~ 35351655 (-) |
| G1543128 | LOC106588245 | other | upstream | 866549 | 35452618 ~ 35504157 (-) |
