Gene
RNA
| Item | Value |
|---|---|
| gene id | G1542731 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34668766 ~ 34668987 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1765501 | True | 222 | lncRNA | 0.60 | 1 | 34668766 | 34668987 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fbxl6 | fbxl6 | coding | downstream | 49399 | 34595231 ~ 34619367 (-) |
| LOC118940975 | LOC106611608 | coding | downstream | 431200 | 34235388 ~ 34237566 (-) |
| gdf6b | gdf6 | coding | downstream | 484875 | 34179033 ~ 34183891 (-) |
| lrp12 | lrp12 | coding | downstream | 801335 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 855465 | 33783934 ~ 33813301 (-) |
| atp9b | atp9b | coding | upstream | 68840 | 34735374 ~ 34794929 (-) |
| sall3b | LOC106588232 | coding | upstream | 126407 | 34795394 ~ 34808500 (-) |
| zbtb22a | LOC106588234 | coding | upstream | 238136 | 34906715 ~ 34923956 (-) |
| LOC110496076 | LOC106588236 | coding | upstream | 265621 | 34933039 ~ 34943891 (-) |
| LOC110496078 | LOC106588238 | coding | upstream | 328485 | 34997472 ~ 34999239 (-) |
| G1542729 | NA | non-coding | downstream | 3270 | 34665242 ~ 34665496 (-) |
| nfatc1 | LOC106588230 | non-coding | downstream | 9608 | 34645116 ~ 34704821 (-) |
| G1542721 | NA | non-coding | downstream | 26537 | 34641813 ~ 34642229 (-) |
| G1542719 | LOC106588229 | non-coding | downstream | 31898 | 34635809 ~ 34636868 (-) |
| G1542718 | NA | non-coding | downstream | 33862 | 34634476 ~ 34634904 (-) |
| G1542753 | NA | non-coding | upstream | 74636 | 34743623 ~ 34744146 (-) |
| G1542857 | NA | non-coding | upstream | 230321 | 34899308 ~ 34899566 (-) |
| G1542864 | NA | non-coding | upstream | 231160 | 34900147 ~ 34900382 (-) |
| G1542865 | NA | non-coding | upstream | 231414 | 34900401 ~ 34900639 (-) |
| G1542867 | NA | non-coding | upstream | 235156 | 34904143 ~ 34904354 (-) |
| G1541318 | NA | other | downstream | 506308 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 994535 | 33657641 ~ 33674304 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 1057873 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 1277014 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1732197 | 32899578 ~ 32936569 (-) |
| G1542988 | sast | other | upstream | 468650 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 506319 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 677908 | 35346895 ~ 35351655 (-) |
| G1543128 | LOC106588245 | other | upstream | 783631 | 35452618 ~ 35504157 (-) |
