G1541666


Basic Information

Item Value
gene id G1541666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 34670262 ~ 34670497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764267
ctccaccgtagtagcaccaacggaaacccctaaacacctacctgagcactctcgcgaccaccccgtgagagtcCTCTGTGGctaagaaacagtggggttatgacaagctaacaagggtaggcccagcaccacgggaaacgcaggagagtccaTAAGGAAAAGACCAATTTTCTCTGTGTGACCCCCCTGATTCACCATGCCCAAAGGAGCGGTGACCTCCCTaaataaccctgacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764267 True 236 lncRNA 0.54 1 34670262 34670497

Neighbor

gene id symbol gene type direction distance location
LOC110496067 LOC106588229 coding upstream 30305 34633226 ~ 34640621 (+)
LOC110496068 slc52a2 coding upstream 37305 34627456 ~ 34632957 (+)
LOC110496065 LOC106588226 coding upstream 46026 34618554 ~ 34624236 (+)
pleca LOC100194709 coding upstream 95325 34376096 ~ 34579125 (+)
mbpa LOC106588233 coding downstream 212995 34883492 ~ 34898413 (+)
LOC110496074 NA coding downstream 248040 34918537 ~ 34921751 (+)
LOC110496075 LOC106588237 coding downstream 288926 34959423 ~ 34986188 (+)
olah sast coding downstream 461264 35131761 ~ 35139834 (+)
LOC110496082 LOC106588242 coding downstream 573700 35237754 ~ 35324664 (+)
G1541644 NA non-coding upstream 26974 34643058 ~ 34643288 (+)
G1541643 NA non-coding upstream 43288 34626477 ~ 34626974 (+)
G1541610 NA non-coding upstream 112151 34557627 ~ 34558111 (+)
G1541697 atp9b non-coding downstream 43342 34713839 ~ 34739528 (+)
G1541694 NA non-coding downstream 64889 34735386 ~ 34738435 (+)
G1541696 NA non-coding downstream 70978 34741475 ~ 34743381 (+)
G1541713 atp9b non-coding downstream 78439 34748936 ~ 34750497 (+)
G1541721 NA non-coding downstream 108424 34778921 ~ 34780838 (+)
LOC110496058 LOC106588349 other upstream 540603 34127192 ~ 34133734 (+)
G1540996 NA other upstream 591188 34078718 ~ 34079074 (+)
LOC110496043 LOC106588212 other upstream 1132698 33535229 ~ 33537569 (+)
G1540551 NA other upstream 1179141 33489337 ~ 33491121 (+)
LOC110496797 LOC106570068 other upstream 1211838 33455560 ~ 33458964 (+)
G1541989 NA other downstream 612106 35282603 ~ 35283706 (+)
G1542037 LOC106588244 other downstream 704747 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 731340 35400723 ~ 35481348 (+)
G1542051 LOC106588245 other downstream 808338 35478835 ~ 35502933 (+)

Expression


Co-expression Network