Gene
RNA
| Item | Value |
|---|---|
| gene id | G1542899 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34953662 ~ 34953872 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1765681 | True | 211 | lncRNA | 0.50 | 1 | 34953662 | 34953872 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496076 | LOC106588236 | coding | downstream | 9771 | 34933039 ~ 34943891 (-) |
| zbtb22a | LOC106588234 | coding | downstream | 29706 | 34906715 ~ 34923956 (-) |
| sall3b | LOC106588232 | coding | downstream | 145162 | 34795394 ~ 34808500 (-) |
| atp9b | atp9b | coding | downstream | 158733 | 34735374 ~ 34794929 (-) |
| nfatc1 | LOC106588230 | coding | downstream | 248841 | 34645116 ~ 34704821 (-) |
| LOC110496078 | LOC106588238 | coding | upstream | 43600 | 34997472 ~ 34999239 (-) |
| LOC110496079 | LOC106588239 | coding | upstream | 58138 | 35012010 ~ 35016157 (-) |
| LOC110496800 | LOC106588240 | coding | upstream | 63106 | 35016978 ~ 35018421 (-) |
| ago3b | i2c3 | coding | upstream | 97523 | 35051395 ~ 35093817 (-) |
| LOC110496081 | LOC106588241 | coding | upstream | 197479 | 35151351 ~ 35203984 (-) |
| G1542893 | NA | non-coding | downstream | 6984 | 34946448 ~ 34946678 (-) |
| G1542892 | NA | non-coding | downstream | 7563 | 34945638 ~ 34946099 (-) |
| G1542891 | NA | non-coding | downstream | 8247 | 34945211 ~ 34945415 (-) |
| G1542885 | NA | non-coding | downstream | 22422 | 34931007 ~ 34931240 (-) |
| G1542902 | NA | non-coding | upstream | 1182 | 34955054 ~ 34955261 (-) |
| G1542903 | NA | non-coding | upstream | 1660 | 34955532 ~ 34955782 (-) |
| G1542904 | NA | non-coding | upstream | 2413 | 34956285 ~ 34956497 (-) |
| G1542905 | LOC106600457 | non-coding | upstream | 2793 | 34956665 ~ 34957490 (-) |
| G1542906 | NA | non-coding | upstream | 4242 | 34958114 ~ 34958387 (-) |
| G1541318 | NA | other | downstream | 791204 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 1279431 | 33657641 ~ 33674304 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 1342769 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 1561910 | 33391339 ~ 33391752 (-) |
| G1542988 | sast | other | upstream | 183765 | 35137637 ~ 35138554 (-) |
| LOC110496085 | NA | other | upstream | 393023 | 35346895 ~ 35351655 (-) |
| G1543128 | LOC106588245 | other | upstream | 498746 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | upstream | 541450 | 35492995 ~ 35499681 (-) |
