G1542859


Basic Information

Item Value
gene id G1542859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35039208 ~ 35050281 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765641
GgaatttaccagttgtgaagtcgGAAATACTAGTGGGATGCATTCACGTGCTTTGAACTCATTGAGAAATGCCGATTGGCTAATGGCTAACAAGCTGCGTAAACCATAAATTAAAAGTACAGCTCTCATGCTTGCAAACAAATTAAAGGGTTCAAAAACCATATTAATAGATTGCTATTTAGAAATGTTTTGTTGCATTTAACTTCCGAAAATGCTGTTATCGAGGTCATTTCCTTAGTAGGTGACAGAGGTCATCATGTGGGAGCACAGGATGATGGACAAATTTACCACTAGTAATTGGCAGTTGGAGGGCCATTCAAGTGGATTTTCCCAGTTGTATGTGGTGAATTCCCACTTGGTTTACGAATGCAGCATTATTCTGAGGCTGGGGGATAATACAGGGGAGACGCGTGGcagcctacagtgcattcggaaagtattcagactctttttctaaatgttgttacgttacagccttattctaaaatagattttctCCTCATGAATCTACAAAcactacccaataatgacaaagcaaaaacaggtttttgcacAAACAttatactttatttacatacgtattcaaaCCCTtagctatgagacttgaaattgagctgtggtaaattcaattgattggacatgatttggaaaggcacagacctgtctatataaggtcccacagttgacagtgcatgtcagagcaaaatctgTGAGTGATGAAAGTTGAAGGAAATGTCTAAGCTCcatgacaggattgtgttgatgcACAGATATGGGGGAagataccaaaaaatgtctgcagcattgaagatctgCAAGAGCatagtggcctccgtttggaaccaccaagactcttcctagatctggccacctgtccaaactgagcaatcgggggagaagggccctggtcagggaggtaaccaagaacccgatggtcactctgacagatggttgtccttctggaaggttctcccatctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765641 True 979 lncRNA 0.42 3 35039208 35050281

Neighbor

gene id symbol gene type direction distance location
LOC110496800 LOC106588240 coding downstream 20787 35016978 ~ 35018421 (-)
LOC110496079 LOC106588239 coding downstream 23051 35012010 ~ 35016157 (-)
LOC110496078 LOC106588238 coding downstream 39969 34997472 ~ 34999239 (-)
LOC110496076 LOC106588236 coding downstream 95317 34933039 ~ 34943891 (-)
zbtb22a LOC106588234 coding downstream 115252 34906715 ~ 34923956 (-)
ago3b i2c3 coding upstream 1114 35051395 ~ 35093817 (-)
LOC110496081 LOC106588241 coding upstream 101070 35151351 ~ 35203984 (-)
LOC110496085 NA coding upstream 297663 35346895 ~ 35351655 (-)
si:ch73-347e22.4 LOC106588244 coding upstream 327518 35377799 ~ 35392845 (-)
LOC110496091 LOC106588245 coding upstream 350445 35400726 ~ 35407830 (-)
G1542914 NA non-coding downstream 64453 34974476 ~ 34974755 (-)
G1542912 NA non-coding downstream 66113 34972215 ~ 34973095 (-)
G1542847 NA non-coding downstream 69690 34968643 ~ 34969518 (-)
G1542851 NA non-coding downstream 70660 34967990 ~ 34968548 (-)
G1542848 NA non-coding downstream 71331 34964360 ~ 34967877 (-)
G1542979 NA non-coding upstream 69696 35119977 ~ 35120250 (-)
G1542990 NA non-coding upstream 93543 35143824 ~ 35144167 (-)
G1542993 NA non-coding upstream 97360 35147641 ~ 35149555 (-)
G1542996 NA non-coding upstream 104031 35154312 ~ 35154536 (-)
G1542999 NA non-coding upstream 114642 35164923 ~ 35165151 (-)
atp9b atp9b other downstream 299569 34735374 ~ 34794929 (-)
G1541318 NA other downstream 876750 34161927 ~ 34162458 (-)
LOC110496049 LOC106588217 other downstream 1364977 33657641 ~ 33674304 (-)
LOC110496048 LOC106588215 other downstream 1428315 33602474 ~ 33610948 (-)
G1540473 LOC106581475 other downstream 1647456 33391339 ~ 33391752 (-)
G1542988 sast other upstream 87356 35137637 ~ 35138554 (-)
G1543128 LOC106588245 other upstream 402337 35452618 ~ 35504157 (-)
LOC118941140 NA other upstream 445041 35492995 ~ 35499681 (-)

Expression


Co-expression Network