G1542988 (sast)


Basic Information

Item Value
gene id G1542988
gene name sast
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35137637 ~ 35138554 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765772
AATAGAATGTGCATCCCAATAATATCCACCATATTTCTTATACCAGCAATTTCCTTTCAAATTAGTgaaagtgcacactttgggaggaaAGAGAGAATTGTGACAAAGCTAGAGACGCCCACCTGTAGTTCTCCACCACGTGGAGGTCGGCTTTCAGCGCAGGTAGGAAGAGCTTTACAACCTCAGGATTGGCCAGTAACTCGGGGGGAGTCCCACCAATCCTGGTCATCCACTGGAGGAACTCCTCGTCTGATAAATCACTTCTCTTTGGGGCTTGGATACGCATCTCAGAGTAGGGTGCAGAGGCACCAGACAGGAAGATGTGAATTGGTTCCAACTTGTGGACTCTTTTCAAAGTATCTGCTATAGCAAAGCTGGTCATGGCGCCAAAGCTGTGGCCAAAGAGGGCAAACGGTTTCTCCTTGAGCACCGGCAGTAGCACATTGATGACCTCATCTACAATCTGCTCCATGCTTTGAAAGAAGGGCTCTTTGGCTCGAGCCTCCCGGCCAGGAAGTTTAACAGCATAC

Function

NR:

description
S-acyl fatty acid synthase thioesterase, medium chain

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765772 True 530 TUCP 0.49 3 35137637 35138554

Neighbor

gene id symbol gene type direction distance location
ago3b i2c3 coding downstream 43820 35051395 ~ 35093817 (-)
LOC110496800 LOC106588240 coding downstream 119216 35016978 ~ 35018421 (-)
LOC110496079 LOC106588239 coding downstream 121480 35012010 ~ 35016157 (-)
LOC110496078 LOC106588238 coding downstream 138398 34997472 ~ 34999239 (-)
LOC110496076 LOC106588236 coding downstream 193746 34933039 ~ 34943891 (-)
LOC110496081 LOC106588241 coding upstream 12797 35151351 ~ 35203984 (-)
LOC110496085 NA coding upstream 209390 35346895 ~ 35351655 (-)
si:ch73-347e22.4 LOC106588244 coding upstream 239245 35377799 ~ 35392845 (-)
LOC110496091 LOC106588245 coding upstream 262172 35400726 ~ 35407830 (-)
LOC118941136 NA coding upstream 269425 35407979 ~ 35415035 (-)
G1542979 NA non-coding downstream 17387 35119977 ~ 35120250 (-)
G1542859 NA non-coding downstream 87356 35039208 ~ 35050281 (-)
G1542914 NA non-coding downstream 162882 34974476 ~ 34974755 (-)
G1542912 NA non-coding downstream 164542 34972215 ~ 34973095 (-)
G1542847 NA non-coding downstream 168119 34968643 ~ 34969518 (-)
G1542990 NA non-coding upstream 5270 35143824 ~ 35144167 (-)
G1542993 NA non-coding upstream 9087 35147641 ~ 35149555 (-)
G1542996 NA non-coding upstream 15758 35154312 ~ 35154536 (-)
G1542999 NA non-coding upstream 26369 35164923 ~ 35165151 (-)
G1543000 NA non-coding upstream 26989 35165543 ~ 35165780 (-)
atp9b atp9b other downstream 397998 34735374 ~ 34794929 (-)
G1541318 NA other downstream 975179 34161927 ~ 34162458 (-)
LOC110496049 LOC106588217 other downstream 1463406 33657641 ~ 33674304 (-)
LOC110496048 LOC106588215 other downstream 1526744 33602474 ~ 33610948 (-)
G1540473 LOC106581475 other downstream 1745885 33391339 ~ 33391752 (-)
G1543128 LOC106588245 other upstream 314064 35452618 ~ 35504157 (-)
LOC118941140 NA other upstream 356768 35492995 ~ 35499681 (-)
G1543346 LOC106588513 other upstream 872433 36010987 ~ 36012686 (-)

Expression


Co-expression Network