G1541943


Basic Information

Item Value
gene id G1541943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35163636 ~ 35163856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764565
cataggaactgagaagtggtctgtggttatcacctgcagaaccactcctttattgggggtgtcttgcctAATTGCCTATAaattccacctgttgtctattccatttgctgttgctgttgtgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacaatgtgttgtttaagtgttccctttatttttttgagcagtgtata

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764565 True 221 lncRNA 0.40 1 35163636 35163856

Neighbor

gene id symbol gene type direction distance location
olah sast coding upstream 23802 35131761 ~ 35139834 (+)
LOC110496075 LOC106588237 coding upstream 177448 34959423 ~ 34986188 (+)
LOC110496074 NA coding upstream 241885 34918537 ~ 34921751 (+)
mbpa LOC106588233 coding upstream 265223 34883492 ~ 34898413 (+)
LOC110496067 LOC106588229 coding upstream 523679 34633226 ~ 34640621 (+)
LOC110496082 LOC106588242 coding downstream 80341 35237754 ~ 35324664 (+)
tomm40l LOC106588243 coding downstream 171192 35335048 ~ 35348295 (+)
LOC118941149 NA coding downstream 248915 35412771 ~ 35433941 (+)
LOC118941148 NA coding downstream 277287 35441143 ~ 35504636 (+)
LOC110496101 LOC106588519 coding downstream 725710 35889566 ~ 35908363 (+)
G1541942 LOC106613263 non-coding upstream 369 35162923 ~ 35163267 (+)
G1541933 NA non-coding upstream 12413 35150678 ~ 35151223 (+)
G1541809 NA non-coding upstream 190713 34972194 ~ 34972923 (+)
G1541811 NA non-coding upstream 194041 34968646 ~ 34969595 (+)
G1541815 NA non-coding upstream 195297 34967990 ~ 34968339 (+)
G1541944 NA non-coding downstream 2376 35166232 ~ 35166452 (+)
G1541946 NA non-coding downstream 8905 35172761 ~ 35173007 (+)
G1541947 NA non-coding downstream 10704 35174560 ~ 35174794 (+)
G1541952 NA non-coding downstream 19169 35183025 ~ 35183334 (+)
G1541956 NA non-coding downstream 22663 35186519 ~ 35186751 (+)
LOC110496058 LOC106588349 other upstream 1033977 34127192 ~ 34133734 (+)
G1540996 NA other upstream 1084562 34078718 ~ 34079074 (+)
LOC110496043 LOC106588212 other upstream 1626072 33535229 ~ 33537569 (+)
G1540551 NA other upstream 1672515 33489337 ~ 33491121 (+)
G1541989 NA other downstream 118747 35282603 ~ 35283706 (+)
G1542037 LOC106588244 other downstream 211388 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 237981 35400723 ~ 35481348 (+)
G1542051 LOC106588245 other downstream 314979 35478835 ~ 35502933 (+)
G1542090 NA other downstream 365687 35529543 ~ 35606179 (+)

Expression


Co-expression Network