G1541956


Basic Information

Item Value
gene id G1541956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35186519 ~ 35186751 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764578
attctacagtagtgatcctaactgacctaagacagggaattttgactaggattaaatgtcaggaattgtgaaaaactgggtttaaatgtatttggctaaggtgtatgtaaacgtccgacttcaactgtacaccatcacaatgaagccattatttattttaggcaggacTAAAGTAACATTATGATATTGAGAAAACGTATTTCAGAATAACAGAATGTGAGTTGGCCTACtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764578 True 233 lncRNA 0.36 1 35186519 35186751

Neighbor

gene id symbol gene type direction distance location
olah sast coding upstream 46685 35131761 ~ 35139834 (+)
LOC110496075 LOC106588237 coding upstream 200331 34959423 ~ 34986188 (+)
LOC110496074 NA coding upstream 264768 34918537 ~ 34921751 (+)
mbpa LOC106588233 coding upstream 288106 34883492 ~ 34898413 (+)
LOC110496067 LOC106588229 coding upstream 546562 34633226 ~ 34640621 (+)
LOC110496082 LOC106588242 coding downstream 57446 35237754 ~ 35324664 (+)
tomm40l LOC106588243 coding downstream 148297 35335048 ~ 35348295 (+)
LOC118941149 NA coding downstream 226020 35412771 ~ 35433941 (+)
LOC118941148 NA coding downstream 254392 35441143 ~ 35504636 (+)
LOC110496101 LOC106588519 coding downstream 702815 35889566 ~ 35908363 (+)
G1541952 NA non-coding upstream 3185 35183025 ~ 35183334 (+)
G1541947 NA non-coding upstream 11725 35174560 ~ 35174794 (+)
G1541946 NA non-coding upstream 13512 35172761 ~ 35173007 (+)
G1541944 NA non-coding upstream 20067 35166232 ~ 35166452 (+)
G1541943 NA non-coding upstream 22663 35163636 ~ 35163856 (+)
G1541987 NA non-coding downstream 92458 35279209 ~ 35280296 (+)
G1542015 NA non-coding downstream 122892 35309643 ~ 35309861 (+)
G1542017 NA non-coding downstream 129881 35316632 ~ 35316832 (+)
G1541982 NA non-coding downstream 138939 35325690 ~ 35327753 (+)
LOC110496058 LOC106588349 other upstream 1056860 34127192 ~ 34133734 (+)
G1540996 NA other upstream 1107445 34078718 ~ 34079074 (+)
LOC110496043 LOC106588212 other upstream 1648955 33535229 ~ 33537569 (+)
G1540551 NA other upstream 1695398 33489337 ~ 33491121 (+)
G1541989 NA other downstream 95852 35282603 ~ 35283706 (+)
G1542037 LOC106588244 other downstream 188493 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 215086 35400723 ~ 35481348 (+)
G1542051 LOC106588245 other downstream 292084 35478835 ~ 35502933 (+)
G1542090 NA other downstream 342792 35529543 ~ 35606179 (+)

Expression


Co-expression Network