G1541989


Basic Information

Item Value
gene id G1541989
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35282603 ~ 35283706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764613
gatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcttccactcgttacctgtattaatggcacctgtttgaacttgttatcagtataaaagacacctgtccacaaccccaaacagtcacactccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactgataatctccctcgatctggggctccacgcaagatctcaccccgtggggtcaaaattataacaagaacggtgagcaaaaatcccataaccacacggggggacctagtgaataatctgcagagagctgggaccaaagtaacaaagcctaccatcagtaacacacgccgccagggactcaaatcctgcagtgccagacgtgtccccctgcttaagccagtacatgtccaggcccgtctgaagtttgctagagagcatttggatgatccagaagaagattgtcatatggtcagatgaaaccaaaatataactttttggtaaaaactcaactcgtcatgtttggaggacaaagaatgctgagttgcatctaaAGAACAccatactgtgaagcatgggggtggaaacatgctttggggctgtttttctgcaaagggaccaggacaactgatccgtgtaaaggaaagaatgaatggggccatgtatcgtgagattttgagtgaaaacctccttccatcagcaagggcattgaagatgagaTGTGGCtcggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacaaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgccctgcaacagccccaaaatatcactgctctagagtagatctgcatggaggaatggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacctctgtca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764613 True 1104 TUCP 0.46 1 35282603 35283706

Neighbor

gene id symbol gene type direction distance location
olah sast coding upstream 142769 35131761 ~ 35139834 (+)
LOC110496075 LOC106588237 coding upstream 296415 34959423 ~ 34986188 (+)
LOC110496074 NA coding upstream 360852 34918537 ~ 34921751 (+)
mbpa LOC106588233 coding upstream 384190 34883492 ~ 34898413 (+)
LOC110496067 LOC106588229 coding upstream 642646 34633226 ~ 34640621 (+)
tomm40l LOC106588243 coding downstream 51342 35335048 ~ 35348295 (+)
LOC118941149 NA coding downstream 129065 35412771 ~ 35433941 (+)
LOC118941148 NA coding downstream 157437 35441143 ~ 35504636 (+)
LOC110496101 LOC106588519 coding downstream 605860 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 687351 35971057 ~ 35974902 (+)
G1541987 NA non-coding upstream 2307 35279209 ~ 35280296 (+)
LOC110496082 LOC106588242 non-coding upstream 36677 35237754 ~ 35324664 (+)
G1541956 NA non-coding upstream 95852 35186519 ~ 35186751 (+)
G1541952 NA non-coding upstream 99269 35183025 ~ 35183334 (+)
G1541947 NA non-coding upstream 107809 35174560 ~ 35174794 (+)
G1542015 NA non-coding downstream 25937 35309643 ~ 35309861 (+)
G1542017 NA non-coding downstream 32926 35316632 ~ 35316832 (+)
G1541982 NA non-coding downstream 41984 35325690 ~ 35327753 (+)
G1542032 NA non-coding downstream 81132 35364838 ~ 35367546 (+)
G1542036 NA non-coding downstream 89132 35372838 ~ 35373207 (+)
LOC110496058 LOC106588349 other upstream 1152944 34127192 ~ 34133734 (+)
G1540996 NA other upstream 1203529 34078718 ~ 34079074 (+)
LOC110496043 LOC106588212 other upstream 1745039 33535229 ~ 33537569 (+)
G1540551 NA other upstream 1791482 33489337 ~ 33491121 (+)
G1542037 LOC106588244 other downstream 91538 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 118131 35400723 ~ 35481348 (+)
G1542051 LOC106588245 other downstream 195129 35478835 ~ 35502933 (+)
G1542090 NA other downstream 245837 35529543 ~ 35606179 (+)
G1542253 NA other downstream 552130 35835836 ~ 35836617 (+)

Expression


Co-expression Network