Gene
RNA
| Item | Value |
|---|---|
| gene id | G1543093 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 35320778 ~ 35321048 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable ATP-dependent RNA helicase ddx6-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1765893 | True | 271 | lncRNA | 0.42 | 1 | 35320778 | 35321048 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496081 | LOC106588241 | coding | downstream | 116794 | 35151351 ~ 35203984 (-) |
| ago3b | i2c3 | coding | downstream | 226961 | 35051395 ~ 35093817 (-) |
| LOC110496800 | LOC106588240 | coding | downstream | 302357 | 35016978 ~ 35018421 (-) |
| LOC110496079 | LOC106588239 | coding | downstream | 304621 | 35012010 ~ 35016157 (-) |
| LOC110496078 | LOC106588238 | coding | downstream | 321539 | 34997472 ~ 34999239 (-) |
| LOC110496085 | NA | coding | upstream | 26896 | 35346895 ~ 35351655 (-) |
| si:ch73-347e22.4 | LOC106588244 | coding | upstream | 56751 | 35377799 ~ 35392845 (-) |
| LOC110496091 | LOC106588245 | coding | upstream | 79678 | 35400726 ~ 35407830 (-) |
| LOC118941136 | NA | coding | upstream | 86931 | 35407979 ~ 35415035 (-) |
| LOC118941138 | NA | coding | upstream | 94140 | 35415188 ~ 35419901 (-) |
| G1543092 | NA | non-coding | downstream | 294 | 35319807 ~ 35320484 (-) |
| G1543089 | NA | non-coding | downstream | 4266 | 35316308 ~ 35316512 (-) |
| G1543081 | NA | non-coding | downstream | 13892 | 35306683 ~ 35306886 (-) |
| G1543063 | NA | non-coding | downstream | 37754 | 35282523 ~ 35283024 (-) |
| G1543064 | NA | non-coding | downstream | 40131 | 35279667 ~ 35280647 (-) |
| G1543087 | NA | non-coding | upstream | 4794 | 35325842 ~ 35327790 (-) |
| G1543088 | NA | non-coding | upstream | 6842 | 35327890 ~ 35330154 (-) |
| G1543086 | NA | non-coding | upstream | 11224 | 35332272 ~ 35334302 (-) |
| G1543103 | NA | non-coding | upstream | 19354 | 35340402 ~ 35360570 (-) |
| G1543097 | NA | non-coding | upstream | 52800 | 35373848 ~ 35375167 (-) |
| G1542988 | sast | other | downstream | 182224 | 35137637 ~ 35138554 (-) |
| atp9b | atp9b | other | downstream | 581139 | 34735374 ~ 34794929 (-) |
| G1541318 | NA | other | downstream | 1158320 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 1646547 | 33657641 ~ 33674304 (-) |
| G1543128 | LOC106588245 | other | upstream | 131570 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | upstream | 174274 | 35492995 ~ 35499681 (-) |
| G1543346 | LOC106588513 | other | upstream | 689939 | 36010987 ~ 36012686 (-) |
| G1544806 | NA | other | upstream | 1980460 | 37301508 ~ 37302174 (-) |
