Gene
RNA
| Item | Value |
|---|---|
| gene id | G1543103 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 35340402 ~ 35360570 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109523355 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1765905 | True | 202 | lncRNA | 0.58 | 2 | 35340402 | 35360570 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496081 | LOC106588241 | coding | downstream | 136418 | 35151351 ~ 35203984 (-) |
| ago3b | i2c3 | coding | downstream | 246585 | 35051395 ~ 35093817 (-) |
| LOC110496800 | LOC106588240 | coding | downstream | 321981 | 35016978 ~ 35018421 (-) |
| LOC110496079 | LOC106588239 | coding | downstream | 324245 | 35012010 ~ 35016157 (-) |
| LOC110496078 | LOC106588238 | coding | downstream | 341163 | 34997472 ~ 34999239 (-) |
| si:ch73-347e22.4 | LOC106588244 | coding | upstream | 17229 | 35377799 ~ 35392845 (-) |
| LOC110496091 | LOC106588245 | coding | upstream | 40156 | 35400726 ~ 35407830 (-) |
| LOC118941136 | NA | coding | upstream | 47409 | 35407979 ~ 35415035 (-) |
| LOC118941138 | NA | coding | upstream | 54618 | 35415188 ~ 35419901 (-) |
| LOC110496802 | LOC106588245 | coding | upstream | 61804 | 35422374 ~ 35427024 (-) |
| G1543086 | NA | non-coding | downstream | 6100 | 35332272 ~ 35334302 (-) |
| G1543088 | NA | non-coding | downstream | 10248 | 35327890 ~ 35330154 (-) |
| G1543087 | NA | non-coding | downstream | 12612 | 35325842 ~ 35327790 (-) |
| G1543093 | NA | non-coding | downstream | 19354 | 35320778 ~ 35321048 (-) |
| G1543092 | NA | non-coding | downstream | 19918 | 35319807 ~ 35320484 (-) |
| G1543097 | NA | non-coding | upstream | 13278 | 35373848 ~ 35375167 (-) |
| G1543096 | NA | non-coding | upstream | 14861 | 35375431 ~ 35376793 (-) |
| G1543118 | NA | non-coding | upstream | 35796 | 35396366 ~ 35396641 (-) |
| G1543122 | NA | non-coding | upstream | 39684 | 35400254 ~ 35400492 (-) |
| G1543124 | NA | non-coding | upstream | 40158 | 35400728 ~ 35408945 (-) |
| G1542988 | sast | other | downstream | 201848 | 35137637 ~ 35138554 (-) |
| atp9b | atp9b | other | downstream | 600763 | 34735374 ~ 34794929 (-) |
| G1541318 | NA | other | downstream | 1177944 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 1666171 | 33657641 ~ 33674304 (-) |
| G1543128 | LOC106588245 | other | upstream | 92048 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | upstream | 134752 | 35492995 ~ 35499681 (-) |
| G1543346 | LOC106588513 | other | upstream | 650417 | 36010987 ~ 36012686 (-) |
| G1544806 | NA | other | upstream | 1940938 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 2561585 | 37922153 ~ 37930745 (-) |
