G1542036


Basic Information

Item Value
gene id G1542036
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35372838 ~ 35373207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764670
CACATACAGTTGTTACCGTATCACTTTTATAGCTTATAGAATGCATCTCTCTGCACCTTTTGTATAGGAATGTGTGTTTTGGAGCGATTTATATACGCAATGGGAACTTCACCCCAAAAGAGTCATGTTTGGAAAGCTGATTTTAGTGGATGTGTTATGGACAGCTCTCTCCTGTGCCAGTGGCAGTTCATAGGGAATCACCACTACAACAGTAAGAACTTAACTCTCGTTGGAAATTGGACTGATGGATCATTGCATGCAGCATGTCGGATTATTGGAATCATTAGTTTTGCCTATAACAACGAACAAGGGCTGAATGCATAGAATCCGATTTCCAATCTCTGCTGCCTAATTCATTGAAGTGTGAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764670 True 370 lncRNA 0.41 1 35372838 35373207

Neighbor

gene id symbol gene type direction distance location
tomm40l LOC106588243 coding upstream 24543 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 48174 35237754 ~ 35324664 (+)
olah sast coding upstream 233004 35131761 ~ 35139834 (+)
LOC110496075 LOC106588237 coding upstream 386650 34959423 ~ 34986188 (+)
LOC110496074 NA coding upstream 451087 34918537 ~ 34921751 (+)
LOC118941149 NA coding downstream 39564 35412771 ~ 35433941 (+)
LOC118941148 NA coding downstream 67936 35441143 ~ 35504636 (+)
LOC110496101 LOC106588519 coding downstream 516359 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 597850 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 625992 35999199 ~ 36021773 (+)
G1542032 NA non-coding upstream 5292 35364838 ~ 35367546 (+)
G1541982 NA non-coding upstream 45085 35325690 ~ 35327753 (+)
G1542017 NA non-coding upstream 56006 35316632 ~ 35316832 (+)
G1542015 NA non-coding upstream 62977 35309643 ~ 35309861 (+)
G1541987 NA non-coding upstream 92542 35279209 ~ 35280296 (+)
G1542037 LOC106588244 non-coding downstream 664 35373871 ~ 35386463 (+)
G1542038 NA non-coding downstream 13764 35386971 ~ 35387648 (+)
G1542043 NA non-coding downstream 19747 35392954 ~ 35393179 (+)
G1542044 NA non-coding downstream 20919 35394126 ~ 35394379 (+)
G1542047 NA non-coding downstream 23174 35396381 ~ 35396998 (+)
G1541989 NA other upstream 89132 35282603 ~ 35283706 (+)
mbpa LOC106588233 other upstream 474427 34883492 ~ 34898413 (+)
LOC110496058 LOC106588349 other upstream 1243179 34127192 ~ 34133734 (+)
G1540996 NA other upstream 1293764 34078718 ~ 34079074 (+)
LOC110496043 LOC106588212 other upstream 1835274 33535229 ~ 33537569 (+)
G1542052 LOC106588245 other downstream 28630 35400723 ~ 35481348 (+)
G1542051 LOC106588245 other downstream 105628 35478835 ~ 35502933 (+)
G1542090 NA other downstream 156336 35529543 ~ 35606179 (+)
G1542253 NA other downstream 462629 35835836 ~ 35836617 (+)

Expression


Co-expression Network