G1543097


Basic Information

Item Value
gene id G1543097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35373848 ~ 35375167 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765899
AGCtcctagcacctactaccataccctgttcaataacctgttcaaaggcacttcaatcttttgtcttgcccattcaccctctgaattgcacacatacacaatccatgtctcaattgtatcaaggcttaacatttcttctttaacctgtctcttccccttcatctacactgactgaaatggttttaacaagtgacatcaataagggatacaactggtcagtctgtcatggaaagagtaggtgttcttaatgttttgtacactactgCAAGAATGTGCCTTTTGAATAGATTACAAACTTGTCATACTTTAAACAGTTATTCATATCCAGTGgtgggaaaaagtacccaattgtcatacttgagtaaaatgatagataccttaatagaaagttactcaagtgaaagtcacccaggaaAATActaagtatttggttctaaatatacttaagtatcaaaagtaaaagtgtacatcatttcaaattccttatattaagcaaagcagactgTACCACtttcttgttttaaaaatgtaggatagccaggggcactttCCAAcactgacattatttacaaacgATGCATTTGTGTTAGTTAGcttgccagatcagaggcagagggatgaccacgtgttctcttgataactgtgtgaattggaccattttcctgtcctgctaagcattcaaaatgtgattagtacttttgggtgtcagggtaaaagtaagtaaaagttgtcaaaaatataaatcgtAAAGTACAGACCacataaaaatactttaaagtactacttaagtactttacaccactgttcaaATCTGTCCTGCTGCTGTTGGCAACGTTTTCTTCTATTTTTGTAAGAGCTTTATGTACACAGACACCATGAGTGTCTCTCTTTTTATTATGTTTAACATGGGATATATTGCACATTTGATAACGCACACTAATTGCATCCTTTGGGGAAACGGTTAGATCTGCTTTCCAAACAGTCAATAGTTTGGTAATGGTGATTACTTAAACATCTTTGATTTCTGGAAGGTGGTTTGGCACGTTATAGAAAGTCGGTCATTTTTAAATGTCAAAGATTTCATTGGACATTCAGTAAGCATTACTCATTGAATATTTAGGCACTGTGTGCACGTACAACATGAGTATGAAAATGTTTGAAATGTAATTGTAACACAAACGTGATGAAAAATATTAGTTATTGATTCTGTGCTGGTAAGTTTTCATTCTTAAGATGTCACTGTCTCATTATCAATGCAAAATGTGTTTTGCTTTTTACTTTTGATTTACAGTAGTCTGACAATAAAAGTTGACATTACAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765899 True 1320 lncRNA 0.35 1 35373848 35375167

Neighbor

gene id symbol gene type direction distance location
LOC110496085 NA coding downstream 22193 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 coding downstream 169864 35151351 ~ 35203984 (-)
ago3b i2c3 coding downstream 280031 35051395 ~ 35093817 (-)
LOC110496800 LOC106588240 coding downstream 355427 35016978 ~ 35018421 (-)
LOC110496079 LOC106588239 coding downstream 357691 35012010 ~ 35016157 (-)
si:ch73-347e22.4 LOC106588244 coding upstream 2632 35377799 ~ 35392845 (-)
LOC110496091 LOC106588245 coding upstream 25559 35400726 ~ 35407830 (-)
LOC118941136 NA coding upstream 32812 35407979 ~ 35415035 (-)
LOC118941138 NA coding upstream 40021 35415188 ~ 35419901 (-)
LOC110496802 LOC106588245 coding upstream 47207 35422374 ~ 35427024 (-)
G1543103 NA non-coding downstream 13278 35340402 ~ 35360570 (-)
G1543086 NA non-coding downstream 39546 35332272 ~ 35334302 (-)
G1543088 NA non-coding downstream 43694 35327890 ~ 35330154 (-)
G1543087 NA non-coding downstream 46058 35325842 ~ 35327790 (-)
G1543093 NA non-coding downstream 52800 35320778 ~ 35321048 (-)
G1543096 NA non-coding upstream 264 35375431 ~ 35376793 (-)
G1543118 NA non-coding upstream 21199 35396366 ~ 35396641 (-)
G1543122 NA non-coding upstream 25087 35400254 ~ 35400492 (-)
G1543124 NA non-coding upstream 25561 35400728 ~ 35408945 (-)
G1543155 NA non-coding upstream 47165 35422332 ~ 35472010 (-)
G1542988 sast other downstream 235294 35137637 ~ 35138554 (-)
atp9b atp9b other downstream 634209 34735374 ~ 34794929 (-)
G1541318 NA other downstream 1211390 34161927 ~ 34162458 (-)
G1543128 LOC106588245 other upstream 77451 35452618 ~ 35504157 (-)
LOC118941140 NA other upstream 120155 35492995 ~ 35499681 (-)
G1543346 LOC106588513 other upstream 635820 36010987 ~ 36012686 (-)
G1544806 NA other upstream 1926341 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 2546988 37922153 ~ 37930745 (-)

Expression


Co-expression Network