G1543096


Basic Information

Item Value
gene id G1543096
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35375431 ~ 35376793 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765898
ctcggagctctacgaacaatttctttgacctcttggcttggttttcCCTCGGACAAGCattgtcaactatgggacctaatatagacaggtgtgtgcctttccaaataatgtccaatcaattgaatttactacaggtggactccaagttgtagaaagatCTCAAAGATGAGCAAttgaaacagaatgcacctgagctcaattttgagtctcacagcaaagggtctgaatacttatgaaaatatttctgtttttttattacatttgcaaacatttctaaaaacctgtttcgctttgtcattatggggtattgtgtgtacattgatgaggaaaatgttttgtttaatccattttaaaataaatgtggaaaatgccaaggactgaatactttccgaatggactgtatatcaTTGTTTTTGATGAGTACTAAATAAGTTTCCGAGTTAACCATGGTTGTCTTCATAGCTATAGCAATGGTTAAATTAATAATTCACTCCAAACCACTATTTCCTATGATTTTCATTATTAAATAACGCCGATATGTATTTTCGTCGTTATGTTAAGGTAGGAAGCAACTTGAAAATTGTTGCGGAAATACTTTGGAGCTTAAGTCAACTACACTTCTCTCCAGACAGGAGGGCTGGCTAGCTTGCTAGAAAATATAGCTATACACAATATTACTaaagtcaatatcagcatgtgaagtagctagttTAGCTGTAAAATCTCAAACACTGCACTATCAATTTTAGAGttacaatctcaccatgttcaacctggTAGAGATTTTGTCTTGCTCAAAACAGTGAGTGAGGTTGTGAATGCAACACAATGGACCTGTGCTGCTAAGGTCCATTAGTACGTAGTTGGAGGAAAGGATATTGATCTGACGGTGCACTGTGTACTTGaacgcaagtctaagaagtggtagatatcCTAGTGTTTAcctgtggcggcaggtagcctaatagttagagcgttgggccagtaactgaaaggttgctggatcaaatccctgagctgacaagataaatatgtgttgttctgcccctgaacaaggcagttaacccactgttccccggtaggccgtcattgtaaataagaatttgttcttaactgacttgactagttaaataaagtttaaaaaaaataaataaagatatgttctatgtgcggAATTTCTATACTTCACGTTCTTAATTTTTGTTTTTGGTCTTttactttagtttttttttacaccagcttcaaacagctgaaaatacaataccTTTTTGTTACTAAAAAGCGGTTTGGATGGTACAATAATTTTCtacacttgcttgttttgtcacaaacttcAATTATGCGAAATCTAAAACAAATTTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765898 True 1363 lncRNA 0.36 1 35375431 35376793

Neighbor

gene id symbol gene type direction distance location
LOC110496085 NA coding downstream 23776 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 coding downstream 171447 35151351 ~ 35203984 (-)
ago3b i2c3 coding downstream 281614 35051395 ~ 35093817 (-)
LOC110496800 LOC106588240 coding downstream 357010 35016978 ~ 35018421 (-)
LOC110496079 LOC106588239 coding downstream 359274 35012010 ~ 35016157 (-)
si:ch73-347e22.4 LOC106588244 coding upstream 1006 35377799 ~ 35392845 (-)
LOC110496091 LOC106588245 coding upstream 23933 35400726 ~ 35407830 (-)
LOC118941136 NA coding upstream 31186 35407979 ~ 35415035 (-)
LOC118941138 NA coding upstream 38395 35415188 ~ 35419901 (-)
LOC110496802 LOC106588245 coding upstream 45581 35422374 ~ 35427024 (-)
G1543097 NA non-coding downstream 264 35373848 ~ 35375167 (-)
G1543103 NA non-coding downstream 14861 35340402 ~ 35360570 (-)
G1543086 NA non-coding downstream 41129 35332272 ~ 35334302 (-)
G1543088 NA non-coding downstream 45277 35327890 ~ 35330154 (-)
G1543087 NA non-coding downstream 47641 35325842 ~ 35327790 (-)
G1543118 NA non-coding upstream 19573 35396366 ~ 35396641 (-)
G1543122 NA non-coding upstream 23461 35400254 ~ 35400492 (-)
G1543124 NA non-coding upstream 23935 35400728 ~ 35408945 (-)
G1543155 NA non-coding upstream 45539 35422332 ~ 35472010 (-)
G1543161 NA non-coding upstream 100954 35477747 ~ 35485186 (-)
G1542988 sast other downstream 236877 35137637 ~ 35138554 (-)
atp9b atp9b other downstream 635792 34735374 ~ 34794929 (-)
G1541318 NA other downstream 1212973 34161927 ~ 34162458 (-)
G1543128 LOC106588245 other upstream 75825 35452618 ~ 35504157 (-)
LOC118941140 NA other upstream 118529 35492995 ~ 35499681 (-)
G1543346 LOC106588513 other upstream 634194 36010987 ~ 36012686 (-)
G1544806 NA other upstream 1924715 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 2545362 37922153 ~ 37930745 (-)

Expression


Co-expression Network