Gene
RNA
| Item | Value |
|---|---|
| gene id | G1542043 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 35392954 ~ 35393179 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1764689 | True | 226 | lncRNA | 0.46 | 1 | 35392954 | 35393179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tomm40l | LOC106588243 | coding | upstream | 44659 | 35335048 ~ 35348295 (+) |
| LOC110496082 | LOC106588242 | coding | upstream | 68290 | 35237754 ~ 35324664 (+) |
| olah | sast | coding | upstream | 253120 | 35131761 ~ 35139834 (+) |
| LOC110496075 | LOC106588237 | coding | upstream | 406766 | 34959423 ~ 34986188 (+) |
| LOC110496074 | NA | coding | upstream | 471203 | 34918537 ~ 34921751 (+) |
| LOC118941149 | NA | coding | downstream | 19592 | 35412771 ~ 35433941 (+) |
| LOC118941148 | NA | coding | downstream | 47964 | 35441143 ~ 35504636 (+) |
| LOC110496101 | LOC106588519 | coding | downstream | 496387 | 35889566 ~ 35908363 (+) |
| LOC110496105 | LOC106588516 | coding | downstream | 577878 | 35971057 ~ 35974902 (+) |
| LOC110496106 | LOC106588513 | coding | downstream | 606020 | 35999199 ~ 36021773 (+) |
| G1542038 | NA | non-coding | upstream | 5306 | 35386971 ~ 35387648 (+) |
| G1542037 | LOC106588244 | non-coding | upstream | 12948 | 35373871 ~ 35386463 (+) |
| G1542036 | NA | non-coding | upstream | 19747 | 35372838 ~ 35373207 (+) |
| G1542032 | NA | non-coding | upstream | 25408 | 35364838 ~ 35367546 (+) |
| G1541982 | NA | non-coding | upstream | 65201 | 35325690 ~ 35327753 (+) |
| G1542044 | NA | non-coding | downstream | 947 | 35394126 ~ 35394379 (+) |
| G1542047 | NA | non-coding | downstream | 3202 | 35396381 ~ 35396998 (+) |
| G1542052 | LOC106588245 | non-coding | downstream | 7544 | 35400723 ~ 35481348 (+) |
| G1542071 | NA | non-coding | downstream | 34858 | 35428037 ~ 35435399 (+) |
| G1542057 | LOC106588245 | non-coding | downstream | 37852 | 35431031 ~ 35444970 (+) |
| G1541989 | NA | other | upstream | 109248 | 35282603 ~ 35283706 (+) |
| mbpa | LOC106588233 | other | upstream | 494543 | 34883492 ~ 34898413 (+) |
| LOC110496058 | LOC106588349 | other | upstream | 1263295 | 34127192 ~ 34133734 (+) |
| G1540996 | NA | other | upstream | 1313880 | 34078718 ~ 34079074 (+) |
| G1542051 | LOC106588245 | other | downstream | 85656 | 35478835 ~ 35502933 (+) |
| G1542090 | NA | other | downstream | 136364 | 35529543 ~ 35606179 (+) |
| G1542253 | NA | other | downstream | 442657 | 35835836 ~ 35836617 (+) |
| G1542254 | yo84 | other | downstream | 443498 | 35836677 ~ 35837543 (+) |
