G1543155


Basic Information

Item Value
gene id G1543155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35422332 ~ 35472010 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765971
aagTATGTGCTGGACCATGATATCAACAGTTCATATTGCATTACAACTTCGTAAATTCTGTAATATAAAAATAGTAATTGAGGTACACAACAGAATCTATAATTTGTATGAATTCATGTTCCTGTGACCAAAGCTTGTTAGTTTCATGTTTTCAACTTGGTCTCTCAACTTGGGTCTGTTGCTTGGATTAATACAATGTTCTTCAAGATGCAGTTAGAACTATAGAGATACATACCGTAAGTTTTACCtatgtatttatctctgtgatcAGAAACAGGTCTGTGAAACCTCCCCAACGTTCATTTGAGGGTAATgtgaatttctgtttttttagaGAGAGCAAATATTTAGAAAGTTTCATGTAATAAAGTGAAATGTCAAACTTTGtttttgatgtttttttaatCTCAATAAAACCTCAAATATGACTTGCTTtgtctttattttgtattattgtaAAGCTTAAAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765971 True 471 lncRNA 0.31 2 35422332 35472010

Neighbor

gene id symbol gene type direction distance location
LOC118941138 NA coding downstream 2431 35415188 ~ 35419901 (-)
LOC118941136 NA coding downstream 7297 35407979 ~ 35415035 (-)
LOC110496091 LOC106588245 coding downstream 14502 35400726 ~ 35407830 (-)
si:ch73-347e22.4 LOC106588244 coding downstream 29487 35377799 ~ 35392845 (-)
LOC110496085 NA coding downstream 70677 35346895 ~ 35351655 (-)
LOC118941139 NA coding upstream 6648 35478658 ~ 35483335 (-)
LOC118941141 NA coding upstream 13816 35485826 ~ 35488517 (-)
LOC118941140 NA coding upstream 20985 35492995 ~ 35499681 (-)
LOC110496088 NA coding upstream 28136 35500146 ~ 35507339 (-)
LOC118941150 NA coding upstream 48113 35519535 ~ 35679900 (-)
G1543124 NA non-coding downstream 13387 35400728 ~ 35408945 (-)
G1543122 NA non-coding downstream 21840 35400254 ~ 35400492 (-)
G1543118 NA non-coding downstream 25691 35396366 ~ 35396641 (-)
G1543096 NA non-coding downstream 45539 35375431 ~ 35376793 (-)
G1543097 NA non-coding downstream 47165 35373848 ~ 35375167 (-)
G1543161 NA non-coding upstream 5737 35477747 ~ 35485186 (-)
G1543125 LOC106588245 non-coding upstream 6825 35478835 ~ 35502036 (-)
G1543163 NA non-coding upstream 11997 35484007 ~ 35491478 (-)
G1543133 NA non-coding upstream 20988 35492998 ~ 35500613 (-)
G1543154 NA non-coding upstream 39462 35511472 ~ 35511985 (-)
LOC110496081 LOC106588241 other downstream 242304 35151351 ~ 35203984 (-)
G1542988 sast other downstream 283778 35137637 ~ 35138554 (-)
atp9b atp9b other downstream 682693 34735374 ~ 34794929 (-)
G1541318 NA other downstream 1259874 34161927 ~ 34162458 (-)
G1543346 LOC106588513 other upstream 538977 36010987 ~ 36012686 (-)
G1544806 NA other upstream 1829498 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 2450145 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 2675580 38121576 ~ 38152320 (-)

Expression


Co-expression Network