G1542071


Basic Information

Item Value
gene id G1542071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35428037 ~ 35435399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764777
ATATAGTAGCACAATTTATGGCACAAGAGATTTATTTTTAtgtaatttatttttgttttcagtAAATTATTTTGATACGTACCgtcaggtccaaaattattggcacacttgataaagatgagcaaaaaaagactataaaataaaatttaaaaatacTGAGCTATTGTATGCTAAAAAACATTGgaaaattgttattttattgttcagagaaatacattttgtttaacaagtaatatatatatttttaaagataggggtcaaaattgtcatccctgttttcaatacctcaccttgcgaggataatgacactgagcctttttctaaaatgttttatgagattggagaacacatcgggagggatcttagaccattcctccattcagaatctttccagatccttgatatcctttgtctgtgaatatggactgccctcttcaattcaaaccacaggttttcaatggggttcaagtcaagagactgagatggccattgcaaagtattggttttgtggtcaattaatcATTTATTTGTAGATTATGTGTTCTTGGGGTTAGTGTCTTGCTGGAAGAGCCACTTgcagccaagtttcagcctcctggcagaggcaaccagagcTGCGtgcgaatacccatactaacatacgtATACTGCacacttaatgagtatatactacatagtTAATTTTAATATACTGTACACGAACAGTAtgctttcagttgagcgtactgtCTCTTCActtgtctaccggaagttgatgctgttgctatgcaacctcttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764777 True 778 lncRNA 0.35 2 35428037 35435399

Neighbor

gene id symbol gene type direction distance location
tomm40l LOC106588243 coding upstream 79742 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 103373 35237754 ~ 35324664 (+)
olah sast coding upstream 288203 35131761 ~ 35139834 (+)
LOC110496075 LOC106588237 coding upstream 441849 34959423 ~ 34986188 (+)
LOC110496074 NA coding upstream 506286 34918537 ~ 34921751 (+)
LOC118941148 NA coding downstream 5744 35441143 ~ 35504636 (+)
LOC110496101 LOC106588519 coding downstream 454167 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 535658 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 563800 35999199 ~ 36021773 (+)
LOC110496108 LOC106588512 coding downstream 588494 36023893 ~ 36068107 (+)
G1542052 LOC106588245 non-coding upstream 18961 35400723 ~ 35481348 (+)
G1542047 NA non-coding upstream 31039 35396381 ~ 35396998 (+)
G1542044 NA non-coding upstream 33658 35394126 ~ 35394379 (+)
G1542043 NA non-coding upstream 34858 35392954 ~ 35393179 (+)
G1542038 NA non-coding upstream 40389 35386971 ~ 35387648 (+)
G1542051 LOC106588245 non-coding downstream 50427 35478835 ~ 35502933 (+)
G1542053 NA non-coding downstream 69768 35505167 ~ 35508295 (+)
G1542056 NA non-coding downstream 76963 35512362 ~ 35518068 (+)
G1542062 NA non-coding downstream 83054 35518453 ~ 35518827 (+)
G1542037 LOC106588244 other upstream 41574 35373871 ~ 35386463 (+)
G1541989 NA other upstream 144331 35282603 ~ 35283706 (+)
mbpa LOC106588233 other upstream 529626 34883492 ~ 34898413 (+)
LOC110496058 LOC106588349 other upstream 1298378 34127192 ~ 34133734 (+)
G1540996 NA other upstream 1348963 34078718 ~ 34079074 (+)
G1542090 NA other downstream 94144 35529543 ~ 35606179 (+)
G1542253 NA other downstream 400437 35835836 ~ 35836617 (+)
G1542254 yo84 other downstream 401278 35836677 ~ 35837543 (+)
G1542262 NA other downstream 410415 35845814 ~ 35846196 (+)

Expression


Co-expression Network