G1543128 (LOC106588245)


Basic Information

Item Value
gene id G1543128
gene name LOC106588245
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35452618 ~ 35504157 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765944
AGCTTTCACCCGCCACAACGTCTGGTTGAAATTCaaatcgctagctagctaaacaattacaACAAAGGCCGATTAAACATCTGGCGACTTTCATGACAAACGATATCTGATAGAAGTGTAGACAGCACCAGCTACGCAAGGATTGTACCAAGTGGGAAGCCCTAAGTAGTTCACAAGACCTCCTAGGAAGTGAGCTGGAAGGAAAGAAAGGAGCCAGGTTGCAAGAAAACAGATGAAAGAAGGGGCAACAATGTCGGAAGAAGGGGCAACAATGTCGGATGAAGGGGCAACAATGTCGGATGAAGGGGCAACAATGTCGGATGAAGGGGCAACGGCTTCGAAAGAAGGGGCAATGGATGCCACTGGTAGTGAAGAGGAGTCCGATGCCTTGTCTAATGGCAGCCCCATACCACCTAAGAGGGGAAGGGGTAGGCCCAAAGGATCAGGCTCCAAGAAACCTAAGATACTGAGGGTACTAGACAAGCA

Function

NR:

description
protein ENL-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765944 True 486 TUCP 0.49 2 35452618 35504157

Neighbor

gene id symbol gene type direction distance location
LOC118941146 LOC106588245 coding downstream 5623 35443262 ~ 35446995 (-)
LOC118941147 LOC106588245 coding downstream 12491 35436159 ~ 35440127 (-)
LOC118941137 NA coding downstream 16614 35429571 ~ 35436004 (-)
LOC110496802 LOC106588245 coding downstream 25594 35422374 ~ 35427024 (-)
LOC118941138 NA coding downstream 32717 35415188 ~ 35419901 (-)
LOC118941150 NA coding upstream 15966 35519535 ~ 35679900 (-)
LOC110496097 LOC105009768 coding upstream 213798 35717955 ~ 35721190 (-)
LOC110496098 LOC106588247 coding upstream 237195 35741352 ~ 35808050 (-)
LOC110496099 LOC106588248 coding upstream 304809 35808966 ~ 35816670 (-)
LOC110496100 LOC106588520 coding upstream 367528 35871685 ~ 35882464 (-)
G1543124 NA non-coding downstream 43673 35400728 ~ 35408945 (-)
G1543122 NA non-coding downstream 52126 35400254 ~ 35400492 (-)
G1543118 NA non-coding downstream 55977 35396366 ~ 35396641 (-)
G1543096 NA non-coding downstream 75825 35375431 ~ 35376793 (-)
G1543097 NA non-coding downstream 77451 35373848 ~ 35375167 (-)
G1543154 NA non-coding upstream 7315 35511472 ~ 35511985 (-)
G1543148 NA non-coding upstream 12982 35517139 ~ 35517936 (-)
G1543265 NA non-coding upstream 247874 35752031 ~ 35752372 (-)
G1543285 NA non-coding upstream 339020 35843177 ~ 35843412 (-)
LOC110496085 NA other downstream 102956 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 272590 35151351 ~ 35203984 (-)
G1542988 sast other downstream 314064 35137637 ~ 35138554 (-)
atp9b atp9b other downstream 712979 34735374 ~ 34794929 (-)
G1541318 NA other downstream 1290160 34161927 ~ 34162458 (-)
G1543346 LOC106588513 other upstream 506830 36010987 ~ 36012686 (-)
G1544806 NA other upstream 1797351 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 2417998 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 2643433 38121576 ~ 38152320 (-)
G1546053 NA other upstream 2661093 38165250 ~ 38214049 (-)

Expression


Co-expression Network