G1543154


Basic Information

Item Value
gene id G1543154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35511472 ~ 35511985 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765970
GCtcggtcccctcctgtactccctgttcacccacgacccaagtctaggacaaaaaggcttctcaacagtttttacccccaagccataagactcctgaacatctaaccaAATGgttaaccgggctatctgcatagTGTCCCACCAcacgccaacccctctttttacgcttctgctactctctgttcatcatatatgcatagtcactttaacaatacctacatgtacatactgcctcaataagcctgactaacaggtgtctgtatatagccttgctactcttttttcaagcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactttttttcccgcaccattggttagagcctgtaagtaagcatttcactgtaacctgttgtattcggcgcacgtgacaaataaactttgatttgatttgatatttttctgacatcacactcccagagccctcacctcctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765970 True 514 lncRNA 0.46 1 35511472 35511985

Neighbor

gene id symbol gene type direction distance location
LOC110496088 NA coding downstream 4133 35500146 ~ 35507339 (-)
LOC118941140 NA coding downstream 11791 35492995 ~ 35499681 (-)
LOC118941141 NA coding downstream 22955 35485826 ~ 35488517 (-)
LOC118941139 NA coding downstream 28137 35478658 ~ 35483335 (-)
LOC118941143 LOC106588245 coding downstream 35366 35471584 ~ 35476106 (-)
LOC118941150 NA coding upstream 8138 35519535 ~ 35679900 (-)
LOC110496097 LOC105009768 coding upstream 205970 35717955 ~ 35721190 (-)
LOC110496098 LOC106588247 coding upstream 229367 35741352 ~ 35808050 (-)
LOC110496099 LOC106588248 coding upstream 296981 35808966 ~ 35816670 (-)
LOC110496100 LOC106588520 coding upstream 359700 35871685 ~ 35882464 (-)
G1543125 LOC106588245 non-coding downstream 9436 35478835 ~ 35502036 (-)
G1543133 NA non-coding downstream 10859 35492998 ~ 35500613 (-)
G1543163 NA non-coding downstream 19994 35484007 ~ 35491478 (-)
G1543161 NA non-coding downstream 26286 35477747 ~ 35485186 (-)
G1543155 NA non-coding downstream 39462 35422332 ~ 35472010 (-)
G1543148 NA non-coding upstream 5154 35517139 ~ 35517936 (-)
G1543265 NA non-coding upstream 240046 35752031 ~ 35752372 (-)
G1543285 NA non-coding upstream 331192 35843177 ~ 35843412 (-)
G1543288 NA non-coding upstream 348651 35860636 ~ 35860835 (-)
G1543128 LOC106588245 other downstream 7315 35452618 ~ 35504157 (-)
LOC110496085 NA other downstream 161810 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 331444 35151351 ~ 35203984 (-)
G1542988 sast other downstream 372918 35137637 ~ 35138554 (-)
G1543346 LOC106588513 other upstream 499002 36010987 ~ 36012686 (-)
G1544806 NA other upstream 1789523 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 2410170 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 2635605 38121576 ~ 38152320 (-)
G1546053 NA other upstream 2653265 38165250 ~ 38214049 (-)

Expression


Co-expression Network