G1542055


Basic Information

Item Value
gene id G1542055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35519406 ~ 35520066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764749
AGTGCCTTTGTAGTTCCAAAAGACATTACACATGCATAGGAAACAGGTAATCAAGTAATTTCACATGAGATGGAACATGTTAGAATTGCAAACAGAATGTGTTTATTTTGTGTAAGATTCCAGTGGGTAACTGGTGCTTTAGGCGGTGATATTTCCAGTAGGGTAATTGGTGCTTTAGGCGGTGATATTTCCAGTAGGGTAACTGGTGCTTTAGGCAGTGATTTTTCCAGTAGGGTAACTGGTGCTTTAGGCGGTGATATTTCCAGTACGGTAACTGGTGCTTTAGGTGGTGATATTTCCAGTAGGGTTATATGGTGCTTTAGGTGGTGATATTTCCAGTACGGTAACTGGTGCTTTAGGTGGTGATATTTCCAGTAGGGTAACTGGTGCTTTAGGTGGTGATATTTCCAGTAGGGTAACTGATGCTTTAGGTGGTGATATTTCCAGTAGGGTAACTGGTGCTTTAGGTGgtgatatttctgtgtttccttGGCTGTTCATCCAATGACATCTTCTTGATCCCGATTACATCCTTCTAcctaatagttttttttattcacCCAAATTCTGATGAACTTGCATGCAGCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764749 True 589 lncRNA 0.41 2 35519406 35520066

Neighbor

gene id symbol gene type direction distance location
LOC118941148 NA coding upstream 14770 35441143 ~ 35504636 (+)
LOC118941149 NA coding upstream 85465 35412771 ~ 35433941 (+)
tomm40l LOC106588243 coding upstream 171111 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 194742 35237754 ~ 35324664 (+)
olah sast coding upstream 379572 35131761 ~ 35139834 (+)
LOC110496101 LOC106588519 coding downstream 369500 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 450991 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 479133 35999199 ~ 36021773 (+)
LOC110496108 LOC106588512 coding downstream 503827 36023893 ~ 36068107 (+)
LOC110496111 LOC106588509 coding downstream 562043 36076661 ~ 36091606 (+)
G1542062 NA non-coding upstream 579 35518453 ~ 35518827 (+)
G1542056 NA non-coding upstream 1338 35512362 ~ 35518068 (+)
G1542053 NA non-coding upstream 11111 35505167 ~ 35508295 (+)
G1542051 LOC106588245 non-coding upstream 17342 35478835 ~ 35502933 (+)
G1542090 NA non-coding downstream 9477 35529543 ~ 35606179 (+)
G1542091 NA non-coding downstream 18400 35538466 ~ 35610705 (+)
G1542101 NA non-coding downstream 21393 35541459 ~ 35544343 (+)
G1542093 NA non-coding downstream 22388 35542454 ~ 35599258 (+)
G1542102 NA non-coding downstream 34112 35554178 ~ 35644509 (+)
G1542052 LOC106588245 other upstream 38058 35400723 ~ 35481348 (+)
G1542037 LOC106588244 other upstream 132943 35373871 ~ 35386463 (+)
G1541989 NA other upstream 235700 35282603 ~ 35283706 (+)
mbpa LOC106588233 other upstream 620995 34883492 ~ 34898413 (+)
G1542253 NA other downstream 315770 35835836 ~ 35836617 (+)
G1542254 yo84 other downstream 316611 35836677 ~ 35837543 (+)
G1542262 NA other downstream 325748 35845814 ~ 35846196 (+)
G1542282 NA other downstream 350171 35870237 ~ 35870558 (+)

Expression


Co-expression Network