G1542190


Basic Information

Item Value
gene id G1542190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35757530 ~ 35757743 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764929
GCATATATGTgttaaggttagtatcacaactAAAGCGGCCAAACAACTTCTTAAAATTATGCACAATCCACTTGGCAAGGgctgtagagcctaactggcatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgaggcctctaattttcatcataggtacacttcaactatgacagacaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764929 True 214 lncRNA 0.39 1 35757530 35757743

Neighbor

gene id symbol gene type direction distance location
LOC118941148 NA coding upstream 252894 35441143 ~ 35504636 (+)
LOC118941149 NA coding upstream 323589 35412771 ~ 35433941 (+)
tomm40l LOC106588243 coding upstream 409235 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 432866 35237754 ~ 35324664 (+)
olah sast coding upstream 617696 35131761 ~ 35139834 (+)
LOC110496101 LOC106588519 coding downstream 131823 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 213314 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 241456 35999199 ~ 36021773 (+)
LOC110496108 LOC106588512 coding downstream 266150 36023893 ~ 36068107 (+)
LOC110496111 LOC106588509 coding downstream 324366 36076661 ~ 36091606 (+)
G1542185 NA non-coding upstream 5109 35752159 ~ 35752421 (+)
G1542184 NA non-coding upstream 5425 35751362 ~ 35752105 (+)
G1542183 NA non-coding upstream 6828 35750473 ~ 35750702 (+)
G1542179 LOC106588247 non-coding upstream 12027 35744694 ~ 35745503 (+)
G1542177 NA non-coding upstream 13989 35741390 ~ 35743541 (+)
G1542191 NA non-coding downstream 2321 35760064 ~ 35760306 (+)
G1542220 NA non-coding downstream 34660 35792403 ~ 35796907 (+)
G1542237 NA non-coding downstream 59481 35817224 ~ 35817501 (+)
G1542250 NA non-coding downstream 75771 35833514 ~ 35834127 (+)
G1542251 NA non-coding downstream 76456 35834199 ~ 35834859 (+)
G1542090 NA other upstream 211551 35529543 ~ 35606179 (+)
G1542051 LOC106588245 other upstream 254597 35478835 ~ 35502933 (+)
G1542052 LOC106588245 other upstream 276182 35400723 ~ 35481348 (+)
G1542037 LOC106588244 other upstream 371067 35373871 ~ 35386463 (+)
G1541989 NA other upstream 473824 35282603 ~ 35283706 (+)
G1542253 NA other downstream 78093 35835836 ~ 35836617 (+)
G1542254 yo84 other downstream 78934 35836677 ~ 35837543 (+)
G1542262 NA other downstream 88071 35845814 ~ 35846196 (+)
G1542282 NA other downstream 112494 35870237 ~ 35870558 (+)
G1542324 LOC106588514 other downstream 203458 35961201 ~ 35963705 (+)

Expression


Co-expression Network