G1542250


Basic Information

Item Value
gene id G1542250
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35833514 ~ 35834127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764991
tatgaggggtggacagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcatagatgaccggcagggtcaaataataataatcacagtggttgtcgagggtgcaacaggtcagcacctcaggagtaaatgtcagttggcttttcatagccaatcattcagagtatctcaaccgctcctgctgtctctagagagttgaaaacagcaggtctgggacagcttgcacatccggtgaacaggtcagggttccatagctgcaggcagaacagttgaaactggagcagcagcacagccaggtggactgtggacagcaaggagtcatcaggccaggtagtcctgaggcatggtcctagggctcaggtcctccgagagagggaaagaaagagagaacaagagaaagagagaacgagagaattagagacagcatacttaaattcacacaggacaccggataagactggagaaatactccagatataacagactaaccctagcccccgacacacaaactaccacagcataaatactggaggctgagacaggaaagGTCGGGAGACAcagtggccccatccgacgatacccacGGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764991 True 614 lncRNA 0.50 1 35833514 35834127

Neighbor

gene id symbol gene type direction distance location
LOC118941148 NA coding upstream 328878 35441143 ~ 35504636 (+)
LOC118941149 NA coding upstream 399573 35412771 ~ 35433941 (+)
tomm40l LOC106588243 coding upstream 485219 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 508850 35237754 ~ 35324664 (+)
olah sast coding upstream 693680 35131761 ~ 35139834 (+)
LOC110496101 LOC106588519 coding downstream 55439 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 136930 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 165072 35999199 ~ 36021773 (+)
LOC110496108 LOC106588512 coding downstream 189766 36023893 ~ 36068107 (+)
LOC110496111 LOC106588509 coding downstream 247982 36076661 ~ 36091606 (+)
G1542237 NA non-coding upstream 16013 35817224 ~ 35817501 (+)
G1542220 NA non-coding upstream 36607 35792403 ~ 35796907 (+)
G1542191 NA non-coding upstream 73208 35760064 ~ 35760306 (+)
G1542190 NA non-coding upstream 75771 35757530 ~ 35757743 (+)
G1542185 NA non-coding upstream 81093 35752159 ~ 35752421 (+)
G1542251 NA non-coding downstream 72 35834199 ~ 35834859 (+)
G1542252 NA non-coding downstream 907 35835034 ~ 35835240 (+)
G1542255 NA non-coding downstream 3843 35837970 ~ 35838196 (+)
G1542256 NA non-coding downstream 4328 35838455 ~ 35838780 (+)
G1542268 NA non-coding downstream 16343 35850470 ~ 35852174 (+)
G1542090 NA other upstream 287535 35529543 ~ 35606179 (+)
G1542051 LOC106588245 other upstream 330581 35478835 ~ 35502933 (+)
G1542052 LOC106588245 other upstream 352166 35400723 ~ 35481348 (+)
G1542037 LOC106588244 other upstream 447051 35373871 ~ 35386463 (+)
G1541989 NA other upstream 549808 35282603 ~ 35283706 (+)
G1542253 NA other downstream 1709 35835836 ~ 35836617 (+)
G1542254 yo84 other downstream 2550 35836677 ~ 35837543 (+)
G1542262 NA other downstream 11687 35845814 ~ 35846196 (+)
G1542282 NA other downstream 36110 35870237 ~ 35870558 (+)
G1542324 LOC106588514 other downstream 127074 35961201 ~ 35963705 (+)

Expression


Co-expression Network