G1542254 (yo84)


Basic Information

Item Value
gene id G1542254
gene name yo84
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35836677 ~ 35837543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764995
tcgatcaccacattcttttggagagattggaaacccaaattggtctacacggacaggttctggcctggtttagatcttatctgtcggaaatatatcagtttgtctctgtgaatggtttgtcctctgacaaatcaactgcaaatttcggtgttcctcaaggttccgttttaggaccactattgttttcactatatattttacctcttggggatgttattcgaaaacataatgttaactttcactgctatgcggatgacacacagctgtacatttcaatgaaacatggtgaagcctcaaaattgcccttgctagaagcatgtgtttcagacataaggaagtggatggctgcaaactttctacttttaaattcggacaaaacagagatgcttgttcgaggacccaagaaacaaagagatcttctgttgaatctgacaattaatcttaatggttgtacagtcgtctcaaataaaactgtgaaggacctcggcgttactctggaccctgatctctcttttgaagaacatatcaagaccatttcaaggacagcttttttccatctacgtaacattgcaaaaatctgaaactttctgtccaaaaatgatgcagaaaaatttatcCACGCTTTTGTcgcttctaggttagactactgcaatgctctactttccggctacccgaataaagcactaaataaacttcagttagtgctaaatacggctgctagaatcctgactagaaccaacaaatttgatcatattactccagtgccgtacatacctacacgtacgctacggtcacaagacgcaggcctcctaattgtccctagaatttctaagcaaacagctggaggcagggctttctcctatagag

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764995 True 867 TUCP 0.40 1 35836677 35837543

Neighbor

gene id symbol gene type direction distance location
LOC118941148 NA coding upstream 332041 35441143 ~ 35504636 (+)
LOC118941149 NA coding upstream 402736 35412771 ~ 35433941 (+)
tomm40l LOC106588243 coding upstream 488382 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 512013 35237754 ~ 35324664 (+)
olah sast coding upstream 696843 35131761 ~ 35139834 (+)
LOC110496101 LOC106588519 coding downstream 52023 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 133514 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 161656 35999199 ~ 36021773 (+)
LOC110496108 LOC106588512 coding downstream 186350 36023893 ~ 36068107 (+)
LOC110496111 LOC106588509 coding downstream 244566 36076661 ~ 36091606 (+)
G1542252 NA non-coding upstream 1437 35835034 ~ 35835240 (+)
G1542251 NA non-coding upstream 1818 35834199 ~ 35834859 (+)
G1542250 NA non-coding upstream 2550 35833514 ~ 35834127 (+)
G1542237 NA non-coding upstream 19176 35817224 ~ 35817501 (+)
G1542220 NA non-coding upstream 39770 35792403 ~ 35796907 (+)
G1542255 NA non-coding downstream 427 35837970 ~ 35838196 (+)
G1542256 NA non-coding downstream 912 35838455 ~ 35838780 (+)
G1542268 NA non-coding downstream 12927 35850470 ~ 35852174 (+)
G1542269 NA non-coding downstream 17192 35854735 ~ 35855758 (+)
G1542271 NA non-coding downstream 19460 35857003 ~ 35857580 (+)
G1542253 NA other upstream 60 35835836 ~ 35836617 (+)
G1542090 NA other upstream 290698 35529543 ~ 35606179 (+)
G1542051 LOC106588245 other upstream 333744 35478835 ~ 35502933 (+)
G1542052 LOC106588245 other upstream 355329 35400723 ~ 35481348 (+)
G1542037 LOC106588244 other upstream 450214 35373871 ~ 35386463 (+)
G1542262 NA other downstream 8271 35845814 ~ 35846196 (+)
G1542282 NA other downstream 32694 35870237 ~ 35870558 (+)
G1542324 LOC106588514 other downstream 123658 35961201 ~ 35963705 (+)
G1544007 NA other downstream 926751 36764294 ~ 36765233 (+)

Expression


Co-expression Network