G1542256


Basic Information

Item Value
gene id G1542256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35838455 ~ 35838780 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1764997
tcgaccctgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggattcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgtgtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaataaatttgatttgatttgattcaagaCTTGGACAAGGACTCAATGCAGATTAAAGATGTATTTACA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1764997 True 326 lncRNA 0.44 1 35838455 35838780

Neighbor

gene id symbol gene type direction distance location
LOC118941148 NA coding upstream 333819 35441143 ~ 35504636 (+)
LOC118941149 NA coding upstream 404514 35412771 ~ 35433941 (+)
tomm40l LOC106588243 coding upstream 490160 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 513791 35237754 ~ 35324664 (+)
olah sast coding upstream 698621 35131761 ~ 35139834 (+)
LOC110496101 LOC106588519 coding downstream 50786 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 132277 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 160419 35999199 ~ 36021773 (+)
LOC110496108 LOC106588512 coding downstream 185113 36023893 ~ 36068107 (+)
LOC110496111 LOC106588509 coding downstream 243329 36076661 ~ 36091606 (+)
G1542255 NA non-coding upstream 259 35837970 ~ 35838196 (+)
G1542252 NA non-coding upstream 3215 35835034 ~ 35835240 (+)
G1542251 NA non-coding upstream 3596 35834199 ~ 35834859 (+)
G1542250 NA non-coding upstream 4328 35833514 ~ 35834127 (+)
G1542237 NA non-coding upstream 20954 35817224 ~ 35817501 (+)
G1542268 NA non-coding downstream 11690 35850470 ~ 35852174 (+)
G1542269 NA non-coding downstream 15955 35854735 ~ 35855758 (+)
G1542271 NA non-coding downstream 18223 35857003 ~ 35857580 (+)
G1542272 NA non-coding downstream 18965 35857745 ~ 35858255 (+)
G1542273 NA non-coding downstream 19893 35858673 ~ 35859234 (+)
G1542254 yo84 other upstream 912 35836677 ~ 35837543 (+)
G1542253 NA other upstream 1838 35835836 ~ 35836617 (+)
G1542090 NA other upstream 292476 35529543 ~ 35606179 (+)
G1542051 LOC106588245 other upstream 335522 35478835 ~ 35502933 (+)
G1542052 LOC106588245 other upstream 357107 35400723 ~ 35481348 (+)
G1542262 NA other downstream 7034 35845814 ~ 35846196 (+)
G1542282 NA other downstream 31457 35870237 ~ 35870558 (+)
G1542324 LOC106588514 other downstream 122421 35961201 ~ 35963705 (+)
G1544007 NA other downstream 925514 36764294 ~ 36765233 (+)

Expression


Co-expression Network