G1542272


Basic Information

Item Value
gene id G1542272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35857745 ~ 35858255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765013
TATGCAACCAATGCCTGAAAAACTCCTTCCACCCCTGACCCTCCTCCCCATACAAAAACCGTTGCACTCTCTTAACCCTCATGGCTTTTAACTTCACCTCCAGATCTATTCATCTCAACCCACCCCTATCATAATCTGCTATTATCACATCATGAGCAATCTCCACCCCCTTCCCACCCCACAGGAAATCAGACACTAAATTATTAATTCCCTTCAGAACCCATACAGGCATGTCCATAACCCCTAAGGTATACACACATTTTTGACATCAACAATGCATTCACCACCACCACTTTCCCCCTCAATTTTAATTTCCTTTGTTTCCAGTAATTCAAAGTCGTCTTTATTTTATTAATCACCCCTGTCCAAGTTAAGTCCCTCGCCTCCCGCTCATCTACCCCAATATTCACACCCAATATTCTCACATGTCCCGTAACAGTCTTAAAAGGAATGTTACATGTAGACATAAGTATCATCAGCACATAACATTTGAGACTTCTCTACATTCACC

Function

NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765013 True 511 lncRNA 0.42 1 35857745 35858255

Neighbor

gene id symbol gene type direction distance location
LOC118941148 NA coding upstream 353109 35441143 ~ 35504636 (+)
LOC118941149 NA coding upstream 423804 35412771 ~ 35433941 (+)
tomm40l LOC106588243 coding upstream 509450 35335048 ~ 35348295 (+)
LOC110496082 LOC106588242 coding upstream 533081 35237754 ~ 35324664 (+)
olah sast coding upstream 717911 35131761 ~ 35139834 (+)
LOC110496101 LOC106588519 coding downstream 31311 35889566 ~ 35908363 (+)
LOC110496105 LOC106588516 coding downstream 112802 35971057 ~ 35974902 (+)
LOC110496106 LOC106588513 coding downstream 140944 35999199 ~ 36021773 (+)
LOC110496108 LOC106588512 coding downstream 165638 36023893 ~ 36068107 (+)
LOC110496111 LOC106588509 coding downstream 223854 36076661 ~ 36091606 (+)
G1542271 NA non-coding upstream 165 35857003 ~ 35857580 (+)
G1542269 NA non-coding upstream 1987 35854735 ~ 35855758 (+)
G1542268 NA non-coding upstream 5571 35850470 ~ 35852174 (+)
G1542256 NA non-coding upstream 18965 35838455 ~ 35838780 (+)
G1542255 NA non-coding upstream 19549 35837970 ~ 35838196 (+)
G1542273 NA non-coding downstream 418 35858673 ~ 35859234 (+)
G1542274 NA non-coding downstream 1644 35859899 ~ 35860107 (+)
G1542275 NA non-coding downstream 3084 35861339 ~ 35861761 (+)
G1542276 NA non-coding downstream 3740 35861995 ~ 35863689 (+)
G1542277 NA non-coding downstream 6403 35864658 ~ 35865225 (+)
G1542262 NA other upstream 11549 35845814 ~ 35846196 (+)
G1542254 yo84 other upstream 20202 35836677 ~ 35837543 (+)
G1542253 NA other upstream 21128 35835836 ~ 35836617 (+)
G1542090 NA other upstream 311766 35529543 ~ 35606179 (+)
G1542051 LOC106588245 other upstream 354812 35478835 ~ 35502933 (+)
G1542282 NA other downstream 11982 35870237 ~ 35870558 (+)
G1542324 LOC106588514 other downstream 102946 35961201 ~ 35963705 (+)
G1544007 NA other downstream 906039 36764294 ~ 36765233 (+)
G1544137 NA other downstream 1004668 36862923 ~ 36863183 (+)

Expression


Co-expression Network