Gene
RNA
| Item | Value |
|---|---|
| gene id | G1543288 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 35860636 ~ 35860835 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1766109 | True | 200 | lncRNA | 0.28 | 1 | 35860636 | 35860835 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496099 | LOC106588248 | coding | downstream | 43966 | 35808966 ~ 35816670 (-) |
| LOC110496098 | LOC106588247 | coding | downstream | 52586 | 35741352 ~ 35808050 (-) |
| LOC110496097 | LOC105009768 | coding | downstream | 139446 | 35717955 ~ 35721190 (-) |
| LOC118941150 | NA | coding | downstream | 180736 | 35519535 ~ 35679900 (-) |
| LOC110496088 | NA | coding | downstream | 353297 | 35500146 ~ 35507339 (-) |
| LOC110496100 | LOC106588520 | coding | upstream | 10850 | 35871685 ~ 35882464 (-) |
| LOC110496102 | LOC106570058 | coding | upstream | 51170 | 35912005 ~ 35918139 (-) |
| LOC110496103 | LOC106588514 | coding | upstream | 57458 | 35918293 ~ 35971717 (-) |
| LOC110496104 | LOC106588515 | coding | upstream | 114458 | 35975293 ~ 35980948 (-) |
| LOC110496109 | LOC106588511 | coding | upstream | 210860 | 36068180 ~ 36077299 (-) |
| G1543285 | NA | non-coding | downstream | 17224 | 35843177 ~ 35843412 (-) |
| G1543265 | NA | non-coding | downstream | 108264 | 35752031 ~ 35752372 (-) |
| G1543148 | NA | non-coding | downstream | 342700 | 35517139 ~ 35517936 (-) |
| G1543154 | NA | non-coding | downstream | 348651 | 35511472 ~ 35511985 (-) |
| G1543291 | NA | non-coding | upstream | 8977 | 35869812 ~ 35870192 (-) |
| G1543297 | NA | non-coding | upstream | 24829 | 35885664 ~ 35885894 (-) |
| G1543321 | NA | non-coding | upstream | 110923 | 35971758 ~ 35972855 (-) |
| G1543343 | NA | non-coding | upstream | 146802 | 36007637 ~ 36034838 (-) |
| G1543360 | NA | non-coding | upstream | 177214 | 36038049 ~ 36038260 (-) |
| G1543128 | LOC106588245 | other | downstream | 356479 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 363654 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 510974 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 680608 | 35151351 ~ 35203984 (-) |
| G1542988 | sast | other | downstream | 722082 | 35137637 ~ 35138554 (-) |
| G1543346 | LOC106588513 | other | upstream | 150152 | 36010987 ~ 36012686 (-) |
| G1544806 | NA | other | upstream | 1440673 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 2061320 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 2286755 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 2304415 | 38165250 ~ 38214049 (-) |
