Gene
RNA
| Item | Value |
|---|---|
| gene id | G1543343 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36007637 ~ 36034838 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1766166 | True | 1056 | lncRNA | 0.42 | 2 | 36007637 | 36034838 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496104 | LOC106588515 | coding | downstream | 26689 | 35975293 ~ 35980948 (-) |
| LOC110496103 | LOC106588514 | coding | downstream | 35920 | 35918293 ~ 35971717 (-) |
| LOC110496102 | LOC106570058 | coding | downstream | 89498 | 35912005 ~ 35918139 (-) |
| LOC110496100 | LOC106588520 | coding | downstream | 125173 | 35871685 ~ 35882464 (-) |
| LOC110496099 | LOC106588248 | coding | downstream | 190967 | 35808966 ~ 35816670 (-) |
| LOC110496109 | LOC106588511 | coding | upstream | 36857 | 36068180 ~ 36077299 (-) |
| LOC110496110 | LOC106588509 | coding | upstream | 49296 | 36084134 ~ 36100917 (-) |
| ext1b | LOC103365060 | coding | upstream | 161297 | 36196135 ~ 36308398 (-) |
| samd12 | LOC106588503 | coding | upstream | 301677 | 36336515 ~ 36461461 (-) |
| abrab | LOC106570048 | coding | upstream | 429732 | 36464570 ~ 36465358 (-) |
| G1543321 | NA | non-coding | downstream | 34782 | 35971758 ~ 35972855 (-) |
| G1543297 | NA | non-coding | downstream | 121743 | 35885664 ~ 35885894 (-) |
| G1543291 | NA | non-coding | downstream | 137445 | 35869812 ~ 35870192 (-) |
| G1543288 | NA | non-coding | downstream | 146802 | 35860636 ~ 35860835 (-) |
| G1543285 | NA | non-coding | downstream | 164225 | 35843177 ~ 35843412 (-) |
| G1543360 | NA | non-coding | upstream | 3211 | 36038049 ~ 36038260 (-) |
| G1543363 | NA | non-coding | upstream | 6296 | 36041134 ~ 36041539 (-) |
| G1543364 | NA | non-coding | upstream | 7562 | 36042400 ~ 36043159 (-) |
| G1543390 | NA | non-coding | upstream | 69441 | 36104279 ~ 36104504 (-) |
| G1543128 | LOC106588245 | other | downstream | 503480 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 510655 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 657975 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 827609 | 35151351 ~ 35203984 (-) |
| G1542988 | sast | other | downstream | 869083 | 35137637 ~ 35138554 (-) |
| G1544806 | NA | other | upstream | 1266670 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1887317 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 2112752 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 2130412 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 2524811 | 38557052 ~ 38563365 (-) |
