Gene
RNA
| Item | Value |
|---|---|
| gene id | G1543390 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36104279 ~ 36104504 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1766224 | True | 226 | lncRNA | 0.38 | 1 | 36104279 | 36104504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496110 | LOC106588509 | coding | downstream | 3362 | 36084134 ~ 36100917 (-) |
| LOC110496109 | LOC106588511 | coding | downstream | 26980 | 36068180 ~ 36077299 (-) |
| LOC110496104 | LOC106588515 | coding | downstream | 123331 | 35975293 ~ 35980948 (-) |
| LOC110496103 | LOC106588514 | coding | downstream | 132562 | 35918293 ~ 35971717 (-) |
| LOC110496102 | LOC106570058 | coding | downstream | 186140 | 35912005 ~ 35918139 (-) |
| ext1b | LOC103365060 | coding | upstream | 91631 | 36196135 ~ 36308398 (-) |
| samd12 | LOC106588503 | coding | upstream | 232011 | 36336515 ~ 36461461 (-) |
| abrab | LOC106570048 | coding | upstream | 360066 | 36464570 ~ 36465358 (-) |
| angpt1 | LOC106588502 | coding | upstream | 394308 | 36498812 ~ 36560713 (-) |
| LOC110496117 | LOC106612724 | coding | upstream | 639874 | 36744378 ~ 36747323 (-) |
| G1543364 | NA | non-coding | downstream | 61120 | 36042400 ~ 36043159 (-) |
| G1543363 | NA | non-coding | downstream | 62740 | 36041134 ~ 36041539 (-) |
| G1543360 | NA | non-coding | downstream | 66019 | 36038049 ~ 36038260 (-) |
| G1543343 | NA | non-coding | downstream | 69441 | 36007637 ~ 36034838 (-) |
| G1543428 | NA | non-coding | upstream | 88244 | 36192748 ~ 36193845 (-) |
| G1543605 | NA | non-coding | upstream | 211335 | 36315839 ~ 36316263 (-) |
| G1543639 | NA | non-coding | upstream | 263428 | 36367932 ~ 36369697 (-) |
| G1543727 | NA | non-coding | upstream | 372629 | 36477133 ~ 36477477 (-) |
| G1543346 | LOC106588513 | other | downstream | 91593 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 600122 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 607297 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 754617 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 924251 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 1197004 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1817651 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 2043086 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 2060746 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 2455145 | 38557052 ~ 38563365 (-) |
