G1542415


Basic Information

Item Value
gene id G1542415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36137249 ~ 36141322 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1765170
gcgagaagccgtcttaaggggtcggattcttctgttacggtgagtgaatgaggacccaaaagcgaactaacttaaacagagcttctttaataaccaaacataggtaggctcagatagaccggcagattccgacaggacaggacaaggttacagcaaacatgacgatagtctggctcaggcatgaaacacaacaaacaagaatccgacaaggacaggaacaaaaacagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1765170 True 231 lncRNA 0.46 2 36137249 36141322

Neighbor

gene id symbol gene type direction distance location
LOC110496111 LOC106588509 coding upstream 52483 36076661 ~ 36091606 (+)
LOC110496108 LOC106588512 coding upstream 69142 36023893 ~ 36068107 (+)
LOC110496106 LOC106588513 coding upstream 115476 35999199 ~ 36021773 (+)
LOC110496105 LOC106588516 coding upstream 162347 35971057 ~ 35974902 (+)
LOC110496101 LOC106588519 coding upstream 228886 35889566 ~ 35908363 (+)
LOC110496805 LOC106588507 coding downstream 6381 36147703 ~ 36158391 (+)
med30 LOC106570051 coding downstream 23594 36135094 ~ 36197363 (+)
ext1c LOC106588496 coding downstream 713806 36855128 ~ 36932244 (+)
trnaa-ugc-136 NA coding downstream 795136 36936458 ~ 36936527 (+)
LOC110496123 NA coding downstream 825057 36966379 ~ 36967984 (+)
G1542391 NA non-coding upstream 33116 36103866 ~ 36104133 (+)
G1542389 NA non-coding upstream 35786 36101235 ~ 36101463 (+)
G1542370 NA non-coding upstream 79124 36052878 ~ 36058125 (+)
G1542292 LOC106573797 non-coding upstream 196874 35909153 ~ 35940375 (+)
G1542296 NA non-coding upstream 248741 35888294 ~ 35888508 (+)
G1543508 NA non-coding downstream 174081 36315403 ~ 36315649 (+)
G1543510 NA non-coding downstream 175518 36316840 ~ 36367596 (+)
G1543519 NA non-coding downstream 192673 36333995 ~ 36354936 (+)
G1543598 NA non-coding downstream 320894 36462216 ~ 36462508 (+)
G1543711 LOC100194703 non-coding downstream 325681 36467003 ~ 36467227 (+)
G1542324 LOC106588514 other upstream 173544 35961201 ~ 35963705 (+)
G1542282 NA other upstream 266691 35870237 ~ 35870558 (+)
G1542262 NA other upstream 291053 35845814 ~ 35846196 (+)
G1542254 yo84 other upstream 299706 35836677 ~ 35837543 (+)
G1544007 NA other downstream 622972 36764294 ~ 36765233 (+)
G1544137 NA other downstream 721601 36862923 ~ 36863183 (+)
G1544455 NA other downstream 914661 37055983 ~ 37056487 (+)
LOC110496158 LOC106588463 other downstream 2051930 38193174 ~ 38204538 (+)
G1545533 LOC104965079 other downstream 2533705 38675027 ~ 38676004 (+)

Expression


Co-expression Network