G1544064


Basic Information

Item Value
gene id G1544064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36766788 ~ 36767006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1766926
TCTAAAGAAAGTGAAACTAAACAACTGTAGCGTGCATGGCACAAAGAGCAAGACAAGGAGTGAATCAAATCAGATGTTCATTCTGGAGCGGAAATGGTCCGTAAACTCCTGCCTCTTATCACTATTGACATGTTTAACCTTCCAGGAGGACTTGCCTTTGAATCCTTATCACAAGCTGGGAGTTCAAGCCTGGAACCCCATAACAAAGGAGCACCCTCc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1766926 True 219 lncRNA 0.45 1 36766788 36767006

Neighbor

gene id symbol gene type direction distance location
med30 LOC106570051 coding upstream 572938 36135094 ~ 36197363 (+)
LOC110496805 LOC106588507 coding upstream 608397 36147703 ~ 36158391 (+)
LOC110496111 LOC106588509 coding upstream 682022 36076661 ~ 36091606 (+)
LOC110496108 LOC106588512 coding upstream 698681 36023893 ~ 36068107 (+)
LOC110496106 LOC106588513 coding upstream 745015 35999199 ~ 36021773 (+)
ext1c LOC106588496 coding downstream 88122 36855128 ~ 36932244 (+)
trnaa-ugc-136 NA coding downstream 169452 36936458 ~ 36936527 (+)
LOC110496123 NA coding downstream 199373 36966379 ~ 36967984 (+)
LOC110496127 NA coding downstream 248754 37015760 ~ 37022862 (+)
LOC110496809 LOC106588491 coding downstream 365583 37132589 ~ 37141720 (+)
G1544063 NA non-coding upstream 1175 36765261 ~ 36765613 (+)
G1544005 NA non-coding upstream 5550 36667629 ~ 36761238 (+)
G1543857 NA non-coding upstream 198511 36568063 ~ 36568277 (+)
G1543741 NA non-coding upstream 218121 36487474 ~ 36548667 (+)
G1543735 NA non-coding upstream 284350 36482219 ~ 36482438 (+)
G1544066 NA non-coding downstream 5717 36772723 ~ 36772947 (+)
G1544073 NA non-coding downstream 19697 36786703 ~ 36786985 (+)
G1544074 NA non-coding downstream 20411 36787417 ~ 36787650 (+)
G1544075 NA non-coding downstream 23068 36790074 ~ 36790284 (+)
G1544076 NA non-coding downstream 23871 36790877 ~ 36791110 (+)
G1544007 NA other upstream 1555 36764294 ~ 36765233 (+)
G1542324 LOC106588514 other upstream 803083 35961201 ~ 35963705 (+)
G1542282 NA other upstream 896230 35870237 ~ 35870558 (+)
G1542262 NA other upstream 920592 35845814 ~ 35846196 (+)
G1544137 NA other downstream 95917 36862923 ~ 36863183 (+)
G1544455 NA other downstream 288977 37055983 ~ 37056487 (+)
LOC110496158 LOC106588463 other downstream 1426246 38193174 ~ 38204538 (+)
G1545533 LOC104965079 other downstream 1908021 38675027 ~ 38676004 (+)
LOC110496176 LOC106588451 other downstream 1923432 38677975 ~ 38696088 (+)

Expression


Co-expression Network