G1544073


Basic Information

Item Value
gene id G1544073
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36786703 ~ 36786985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1766935
gatagagagagaagtgATAGATTGATAGGggaggtggggttatgatatAGAACCATATATGGTTGACTAAaccctcaaacacctagatcccctgaacgcagctcactctccagatcccaatcacctgaattctaatcaccttttcacacacctgtatgtcattatcacacactatttagttcagttctttgcaccccatcacggagttattgtttgttttgtggcACACGTCTTTCGGAGCACTGTGTTTTCCCGTAATTTACTCCTCCCGTTTATgatagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1766935 True 283 lncRNA 0.43 1 36786703 36786985

Neighbor

gene id symbol gene type direction distance location
med30 LOC106570051 coding upstream 592853 36135094 ~ 36197363 (+)
LOC110496805 LOC106588507 coding upstream 628312 36147703 ~ 36158391 (+)
LOC110496111 LOC106588509 coding upstream 701937 36076661 ~ 36091606 (+)
LOC110496108 LOC106588512 coding upstream 718596 36023893 ~ 36068107 (+)
LOC110496106 LOC106588513 coding upstream 764930 35999199 ~ 36021773 (+)
ext1c LOC106588496 coding downstream 68143 36855128 ~ 36932244 (+)
trnaa-ugc-136 NA coding downstream 149473 36936458 ~ 36936527 (+)
LOC110496123 NA coding downstream 179394 36966379 ~ 36967984 (+)
LOC110496127 NA coding downstream 228775 37015760 ~ 37022862 (+)
LOC110496809 LOC106588491 coding downstream 345604 37132589 ~ 37141720 (+)
G1544066 NA non-coding upstream 13756 36772723 ~ 36772947 (+)
G1544064 NA non-coding upstream 19697 36766788 ~ 36767006 (+)
G1544063 NA non-coding upstream 21090 36765261 ~ 36765613 (+)
G1544005 NA non-coding upstream 25465 36667629 ~ 36761238 (+)
G1543857 NA non-coding upstream 218426 36568063 ~ 36568277 (+)
G1544074 NA non-coding downstream 432 36787417 ~ 36787650 (+)
G1544075 NA non-coding downstream 3089 36790074 ~ 36790284 (+)
G1544076 NA non-coding downstream 3892 36790877 ~ 36791110 (+)
G1544077 NA non-coding downstream 4275 36791260 ~ 36791607 (+)
G1544078 NA non-coding downstream 4624 36791609 ~ 36791813 (+)
G1544007 NA other upstream 21470 36764294 ~ 36765233 (+)
G1542324 LOC106588514 other upstream 822998 35961201 ~ 35963705 (+)
G1542282 NA other upstream 916145 35870237 ~ 35870558 (+)
G1542262 NA other upstream 940507 35845814 ~ 35846196 (+)
G1544137 NA other downstream 75938 36862923 ~ 36863183 (+)
G1544455 NA other downstream 268998 37055983 ~ 37056487 (+)
LOC110496158 LOC106588463 other downstream 1406267 38193174 ~ 38204538 (+)
G1545533 LOC104965079 other downstream 1888042 38675027 ~ 38676004 (+)
LOC110496176 LOC106588451 other downstream 1903453 38677975 ~ 38696088 (+)

Expression


Co-expression Network