Gene
RNA
| Item | Value |
|---|---|
| gene id | G1544258 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36787856 ~ 36788080 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1767136 | True | 225 | lncRNA | 0.36 | 1 | 36787856 | 36788080 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496117 | LOC106612724 | coding | downstream | 40533 | 36744378 ~ 36747323 (-) |
| angpt1 | LOC106588502 | coding | downstream | 227143 | 36498812 ~ 36560713 (-) |
| abrab | LOC106570048 | coding | downstream | 322498 | 36464570 ~ 36465358 (-) |
| samd12 | LOC106588503 | coding | downstream | 326395 | 36336515 ~ 36461461 (-) |
| ext1b | LOC103365060 | coding | downstream | 479458 | 36196135 ~ 36308398 (-) |
| LOC110496119 | ppp1r36 | coding | upstream | 12436 | 36800516 ~ 36813545 (-) |
| LOC110496120 | LOC106588498 | coding | upstream | 35784 | 36823864 ~ 36835060 (-) |
| zgc:114119 | LOC106588497 | coding | upstream | 143220 | 36931300 ~ 36939648 (-) |
| zgc:101785 | LOC106588494 | coding | upstream | 186916 | 36974996 ~ 36989677 (-) |
| LOC110496124 | LOC106588493 | coding | upstream | 202161 | 36990241 ~ 37056749 (-) |
| G1544253 | NA | non-coding | downstream | 4865 | 36782778 ~ 36782991 (-) |
| G1544252 | NA | non-coding | downstream | 5412 | 36782112 ~ 36782444 (-) |
| G1544246 | NA | non-coding | downstream | 21039 | 36766510 ~ 36766817 (-) |
| G1544000 | NA | non-coding | downstream | 124960 | 36661548 ~ 36662896 (-) |
| G1543855 | NA | non-coding | downstream | 221407 | 36565643 ~ 36566449 (-) |
| G1544260 | NA | non-coding | upstream | 2819 | 36790899 ~ 36791152 (-) |
| G1544269 | NA | non-coding | upstream | 22850 | 36810930 ~ 36811204 (-) |
| G1544271 | NA | non-coding | upstream | 23646 | 36811726 ~ 36812025 (-) |
| G1544291 | NA | non-coding | upstream | 58320 | 36846400 ~ 36846628 (-) |
| G1543346 | LOC106588513 | other | downstream | 775170 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 1283699 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 1290874 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 1438194 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 1607828 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 513428 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1134075 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 1359510 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 1377170 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 1771569 | 38557052 ~ 38563365 (-) |
