G1544123


Basic Information

Item Value
gene id G1544123
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36842459 ~ 36842699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1766985
actgtatacacggTACATGACAAGATGAAGACAAAAGACGCTTGACTGCTACGCTAtcttagactactgcaatgctctactttccgggtCCCCGGattaaacactaaacaaacttcagttagtgctaaacacggctgctagaatcttgactagaaccccaaaatttgatcatattactccagtgctagcctctctacactggcttcctgttaaggcaagggctgatttcaaggttttactg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1766985 True 241 lncRNA 0.43 1 36842459 36842699

Neighbor

gene id symbol gene type direction distance location
med30 LOC106570051 coding upstream 648609 36135094 ~ 36197363 (+)
LOC110496805 LOC106588507 coding upstream 684068 36147703 ~ 36158391 (+)
LOC110496111 LOC106588509 coding upstream 757693 36076661 ~ 36091606 (+)
LOC110496108 LOC106588512 coding upstream 774352 36023893 ~ 36068107 (+)
LOC110496106 LOC106588513 coding upstream 820686 35999199 ~ 36021773 (+)
ext1c LOC106588496 coding downstream 12429 36855128 ~ 36932244 (+)
trnaa-ugc-136 NA coding downstream 93759 36936458 ~ 36936527 (+)
LOC110496123 NA coding downstream 123680 36966379 ~ 36967984 (+)
LOC110496127 NA coding downstream 173061 37015760 ~ 37022862 (+)
LOC110496809 LOC106588491 coding downstream 289890 37132589 ~ 37141720 (+)
G1544118 NA non-coding upstream 5546 36836651 ~ 36836913 (+)
G1544102 NA non-coding upstream 24900 36817349 ~ 36817559 (+)
G1544101 NA non-coding upstream 27553 36814674 ~ 36814906 (+)
G1544098 NA non-coding upstream 30152 36812079 ~ 36812307 (+)
G1544097 NA non-coding upstream 30888 36811028 ~ 36811571 (+)
G1544129 NA non-coding downstream 6764 36849463 ~ 36849701 (+)
G1544135 NA non-coding downstream 18640 36861339 ~ 36861544 (+)
G1544139 NA non-coding downstream 25200 36867899 ~ 36868116 (+)
G1544142 NA non-coding downstream 31780 36874479 ~ 36874691 (+)
G1544007 NA other upstream 77226 36764294 ~ 36765233 (+)
G1542324 LOC106588514 other upstream 878754 35961201 ~ 35963705 (+)
G1542282 NA other upstream 971901 35870237 ~ 35870558 (+)
G1542262 NA other upstream 996263 35845814 ~ 35846196 (+)
G1544137 NA other downstream 20224 36862923 ~ 36863183 (+)
G1544455 NA other downstream 213284 37055983 ~ 37056487 (+)
LOC110496158 LOC106588463 other downstream 1350553 38193174 ~ 38204538 (+)
G1545533 LOC104965079 other downstream 1832328 38675027 ~ 38676004 (+)
LOC110496176 LOC106588451 other downstream 1847739 38677975 ~ 38696088 (+)

Expression


Co-expression Network