Gene
RNA
| Item | Value |
|---|---|
| gene id | G1544291 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36846400 ~ 36846628 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1767170 | True | 229 | lncRNA | 0.40 | 1 | 36846400 | 36846628 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496120 | LOC106588498 | coding | downstream | 11340 | 36823864 ~ 36835060 (-) |
| LOC110496119 | ppp1r36 | coding | downstream | 32855 | 36800516 ~ 36813545 (-) |
| sdc2 | LOC106570046 | coding | downstream | 53003 | 36759185 ~ 36793397 (-) |
| LOC110496117 | LOC106612724 | coding | downstream | 99077 | 36744378 ~ 36747323 (-) |
| angpt1 | LOC106588502 | coding | downstream | 285687 | 36498812 ~ 36560713 (-) |
| zgc:114119 | LOC106588497 | coding | upstream | 84672 | 36931300 ~ 36939648 (-) |
| zgc:101785 | LOC106588494 | coding | upstream | 128368 | 36974996 ~ 36989677 (-) |
| LOC110496124 | LOC106588493 | coding | upstream | 143613 | 36990241 ~ 37056749 (-) |
| prdm1b | LOC106588492 | coding | upstream | 230399 | 37077027 ~ 37090104 (-) |
| LOC110496131 | borea | coding | upstream | 892213 | 37738841 ~ 37744121 (-) |
| G1544271 | NA | non-coding | downstream | 34375 | 36811726 ~ 36812025 (-) |
| G1544269 | NA | non-coding | downstream | 35196 | 36810930 ~ 36811204 (-) |
| G1544260 | NA | non-coding | downstream | 55248 | 36790899 ~ 36791152 (-) |
| G1544258 | NA | non-coding | downstream | 58320 | 36787856 ~ 36788080 (-) |
| G1544292 | NA | non-coding | upstream | 1569 | 36848197 ~ 36848424 (-) |
| G1544302 | NA | non-coding | upstream | 10219 | 36856847 ~ 36857354 (-) |
| G1544304 | NA | non-coding | upstream | 11943 | 36858571 ~ 36858812 (-) |
| G1544308 | NA | non-coding | upstream | 15684 | 36862312 ~ 36862846 (-) |
| G1544309 | NA | non-coding | upstream | 16335 | 36862963 ~ 36863188 (-) |
| G1543346 | LOC106588513 | other | downstream | 833714 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 1342243 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 1349418 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 1496738 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 1666372 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 454880 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1075527 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 1300962 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 1318622 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 1713021 | 38557052 ~ 38563365 (-) |
