G1544302


Basic Information

Item Value
gene id G1544302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36856847 ~ 36857354 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1767181
TGAATATATACACGTATTGATTATTGACGAATATAACTTGAGCTTCGTTCAACTGTCattccccatcagaacccaaaatataagcttgttttacaccaatgtttgtaaacaatgtaaatgcaaACGAACACTGTATAGCTTCATGGTACAAACTAATTTAGATATCAATCCTTGCAGTCTATTAATTTGAGTGTGGTTGCATTTCCCCATGCCCATCCCTCAGCTCGCTCTAAAGCCATTACTGTTTGGTAACAGTGAATGTGAAATCATTCCACAGGTTTAGTGTTTTGATTTCTAATTATTTATGGGGCGTCAGTTTGGACCAGGTCCCCGTCCTTGGCTGCGCTTCATCAGTCAATACCATAAATTAATTATTGTCAGGGGATGTCACCATTTAAATTTGTCAACCAAATGCTTCACCACAGAATTGGCTGTGACACCTCACTTGAAATGGGGTATACTGAGCTTTATAGCTCTGTCAAGTGTATCCAATCTGAGTGTGCAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1767181 True 508 lncRNA 0.39 1 36856847 36857354

Neighbor

gene id symbol gene type direction distance location
LOC110496120 LOC106588498 coding downstream 21787 36823864 ~ 36835060 (-)
LOC110496119 ppp1r36 coding downstream 43302 36800516 ~ 36813545 (-)
sdc2 LOC106570046 coding downstream 63450 36759185 ~ 36793397 (-)
LOC110496117 LOC106612724 coding downstream 109524 36744378 ~ 36747323 (-)
angpt1 LOC106588502 coding downstream 296134 36498812 ~ 36560713 (-)
zgc:114119 LOC106588497 coding upstream 73946 36931300 ~ 36939648 (-)
zgc:101785 LOC106588494 coding upstream 117642 36974996 ~ 36989677 (-)
LOC110496124 LOC106588493 coding upstream 132887 36990241 ~ 37056749 (-)
prdm1b LOC106588492 coding upstream 219673 37077027 ~ 37090104 (-)
LOC110496131 borea coding upstream 881487 37738841 ~ 37744121 (-)
G1544292 NA non-coding downstream 8423 36848197 ~ 36848424 (-)
G1544291 NA non-coding downstream 10219 36846400 ~ 36846628 (-)
G1544271 NA non-coding downstream 44822 36811726 ~ 36812025 (-)
G1544269 NA non-coding downstream 45643 36810930 ~ 36811204 (-)
G1544304 NA non-coding upstream 1217 36858571 ~ 36858812 (-)
G1544308 NA non-coding upstream 4958 36862312 ~ 36862846 (-)
G1544309 NA non-coding upstream 5609 36862963 ~ 36863188 (-)
G1544311 LOC106588496 non-coding upstream 7523 36864877 ~ 36866114 (-)
G1544315 NA non-coding upstream 12979 36870333 ~ 36870567 (-)
G1543346 LOC106588513 other downstream 844161 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 1352690 35452618 ~ 35504157 (-)
LOC118941140 NA other downstream 1359865 35492995 ~ 35499681 (-)
LOC110496085 NA other downstream 1507185 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 1676819 35151351 ~ 35203984 (-)
G1544806 NA other upstream 444154 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 1064801 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 1290236 38121576 ~ 38152320 (-)
G1546053 NA other upstream 1307896 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 1702295 38557052 ~ 38563365 (-)

Expression


Co-expression Network