Gene
RNA
| Item | Value |
|---|---|
| gene id | G1544309 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36862963 ~ 36863188 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1767188 | True | 226 | lncRNA | 0.48 | 1 | 36862963 | 36863188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496120 | LOC106588498 | coding | downstream | 27903 | 36823864 ~ 36835060 (-) |
| LOC110496119 | ppp1r36 | coding | downstream | 49418 | 36800516 ~ 36813545 (-) |
| sdc2 | LOC106570046 | coding | downstream | 69566 | 36759185 ~ 36793397 (-) |
| LOC110496117 | LOC106612724 | coding | downstream | 115640 | 36744378 ~ 36747323 (-) |
| angpt1 | LOC106588502 | coding | downstream | 302250 | 36498812 ~ 36560713 (-) |
| zgc:114119 | LOC106588497 | coding | upstream | 68112 | 36931300 ~ 36939648 (-) |
| zgc:101785 | LOC106588494 | coding | upstream | 111808 | 36974996 ~ 36989677 (-) |
| LOC110496124 | LOC106588493 | coding | upstream | 127053 | 36990241 ~ 37056749 (-) |
| prdm1b | LOC106588492 | coding | upstream | 213839 | 37077027 ~ 37090104 (-) |
| LOC110496131 | borea | coding | upstream | 875653 | 37738841 ~ 37744121 (-) |
| G1544308 | NA | non-coding | downstream | 117 | 36862312 ~ 36862846 (-) |
| G1544304 | NA | non-coding | downstream | 4151 | 36858571 ~ 36858812 (-) |
| G1544302 | NA | non-coding | downstream | 5609 | 36856847 ~ 36857354 (-) |
| G1544292 | NA | non-coding | downstream | 14539 | 36848197 ~ 36848424 (-) |
| G1544291 | NA | non-coding | downstream | 16335 | 36846400 ~ 36846628 (-) |
| G1544311 | LOC106588496 | non-coding | upstream | 1689 | 36864877 ~ 36866114 (-) |
| G1544315 | NA | non-coding | upstream | 7145 | 36870333 ~ 36870567 (-) |
| G1544317 | NA | non-coding | upstream | 8241 | 36871429 ~ 36871674 (-) |
| G1544318 | NA | non-coding | upstream | 8841 | 36872029 ~ 36872258 (-) |
| G1544320 | NA | non-coding | upstream | 10336 | 36873524 ~ 36873792 (-) |
| G1543346 | LOC106588513 | other | downstream | 850277 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 1358806 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 1365981 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 1513301 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 1682935 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 438320 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1058967 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 1284402 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 1302062 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 1696461 | 38557052 ~ 38563365 (-) |
