G1544139


Basic Information

Item Value
gene id G1544139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36867899 ~ 36868116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1767001
cacatatatataacaCGTACTAGTAGAATACTTTACAGGGTTGCTTTAGTTCTAGTTGAAGCACTGAGGTATACGTATCAGGGACGTGGGGGAGGGCGGTGTAATGGCAAAAGGATGTACCTCTCCATTCAGCTTAAACGGATATTCCCATGACGACGGCCTTGCCAAGTGGAAGACGGTGTCAGAGCATAGGCCATTATTCATGACCCAAAAAGTAc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1767001 True 218 lncRNA 0.45 1 36867899 36868116

Neighbor

gene id symbol gene type direction distance location
med30 LOC106570051 coding upstream 674049 36135094 ~ 36197363 (+)
LOC110496805 LOC106588507 coding upstream 709508 36147703 ~ 36158391 (+)
LOC110496111 LOC106588509 coding upstream 783133 36076661 ~ 36091606 (+)
LOC110496108 LOC106588512 coding upstream 799792 36023893 ~ 36068107 (+)
LOC110496106 LOC106588513 coding upstream 846126 35999199 ~ 36021773 (+)
trnaa-ugc-136 NA coding downstream 68342 36936458 ~ 36936527 (+)
LOC110496123 NA coding downstream 98263 36966379 ~ 36967984 (+)
LOC110496127 NA coding downstream 147644 37015760 ~ 37022862 (+)
LOC110496809 LOC106588491 coding downstream 264473 37132589 ~ 37141720 (+)
LOC110496810 LOC106588469 coding downstream 597675 37465791 ~ 37720841 (+)
G1544135 NA non-coding upstream 6355 36861339 ~ 36861544 (+)
G1544129 NA non-coding upstream 18198 36849463 ~ 36849701 (+)
G1544123 NA non-coding upstream 25200 36842459 ~ 36842699 (+)
G1544118 NA non-coding upstream 30986 36836651 ~ 36836913 (+)
G1544102 NA non-coding upstream 50340 36817349 ~ 36817559 (+)
G1544142 NA non-coding downstream 6363 36874479 ~ 36874691 (+)
ext1c LOC106588496 non-coding downstream 63195 36855128 ~ 36932244 (+)
G1544370 NA non-coding downstream 76640 36944756 ~ 36945009 (+)
G1544377 NA non-coding downstream 81516 36949632 ~ 36949845 (+)
G1544379 NA non-coding downstream 81907 36950023 ~ 36950579 (+)
G1544137 NA other upstream 4716 36862923 ~ 36863183 (+)
G1544007 NA other upstream 102666 36764294 ~ 36765233 (+)
G1542324 LOC106588514 other upstream 904194 35961201 ~ 35963705 (+)
G1542282 NA other upstream 997341 35870237 ~ 35870558 (+)
G1544455 NA other downstream 187867 37055983 ~ 37056487 (+)
LOC110496158 LOC106588463 other downstream 1325136 38193174 ~ 38204538 (+)
G1545533 LOC104965079 other downstream 1806911 38675027 ~ 38676004 (+)
LOC110496176 LOC106588451 other downstream 1822322 38677975 ~ 38696088 (+)
G1546605 LOC106588434 other downstream 2248372 39116488 ~ 39120019 (+)

Expression


Co-expression Network