Gene
RNA
| Item | Value |
|---|---|
| gene id | G1544317 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36871429 ~ 36871674 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1767196 | True | 246 | lncRNA | 0.38 | 1 | 36871429 | 36871674 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496120 | LOC106588498 | coding | downstream | 36369 | 36823864 ~ 36835060 (-) |
| LOC110496119 | ppp1r36 | coding | downstream | 57884 | 36800516 ~ 36813545 (-) |
| sdc2 | LOC106570046 | coding | downstream | 78032 | 36759185 ~ 36793397 (-) |
| LOC110496117 | LOC106612724 | coding | downstream | 124106 | 36744378 ~ 36747323 (-) |
| angpt1 | LOC106588502 | coding | downstream | 310716 | 36498812 ~ 36560713 (-) |
| zgc:114119 | LOC106588497 | coding | upstream | 59626 | 36931300 ~ 36939648 (-) |
| zgc:101785 | LOC106588494 | coding | upstream | 103322 | 36974996 ~ 36989677 (-) |
| LOC110496124 | LOC106588493 | coding | upstream | 118567 | 36990241 ~ 37056749 (-) |
| prdm1b | LOC106588492 | coding | upstream | 205353 | 37077027 ~ 37090104 (-) |
| LOC110496131 | borea | coding | upstream | 867167 | 37738841 ~ 37744121 (-) |
| G1544315 | NA | non-coding | downstream | 862 | 36870333 ~ 36870567 (-) |
| G1544311 | LOC106588496 | non-coding | downstream | 5315 | 36864877 ~ 36866114 (-) |
| G1544309 | NA | non-coding | downstream | 8241 | 36862963 ~ 36863188 (-) |
| G1544308 | NA | non-coding | downstream | 8583 | 36862312 ~ 36862846 (-) |
| G1544304 | NA | non-coding | downstream | 12617 | 36858571 ~ 36858812 (-) |
| G1544318 | NA | non-coding | upstream | 355 | 36872029 ~ 36872258 (-) |
| G1544320 | NA | non-coding | upstream | 1850 | 36873524 ~ 36873792 (-) |
| G1544326 | NA | non-coding | upstream | 8994 | 36880668 ~ 36939089 (-) |
| G1544372 | NA | non-coding | upstream | 73862 | 36945536 ~ 36945874 (-) |
| G1544375 | NA | non-coding | upstream | 76052 | 36947726 ~ 36947955 (-) |
| G1543346 | LOC106588513 | other | downstream | 858743 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 1367272 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 1374447 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 1521767 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 1691401 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 429834 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 1050481 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 1275916 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 1293576 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 1687975 | 38557052 ~ 38563365 (-) |
