Gene
RNA
| Item | Value |
|---|---|
| gene id | G1544375 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 36947726 ~ 36947955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1767257 | True | 230 | lncRNA | 0.41 | 1 | 36947726 | 36947955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:114119 | LOC106588497 | coding | downstream | 8078 | 36931300 ~ 36939648 (-) |
| LOC110496120 | LOC106588498 | coding | downstream | 112666 | 36823864 ~ 36835060 (-) |
| LOC110496119 | ppp1r36 | coding | downstream | 134181 | 36800516 ~ 36813545 (-) |
| sdc2 | LOC106570046 | coding | downstream | 154329 | 36759185 ~ 36793397 (-) |
| LOC110496117 | LOC106612724 | coding | downstream | 200403 | 36744378 ~ 36747323 (-) |
| zgc:101785 | LOC106588494 | coding | upstream | 27041 | 36974996 ~ 36989677 (-) |
| LOC110496124 | LOC106588493 | coding | upstream | 42286 | 36990241 ~ 37056749 (-) |
| prdm1b | LOC106588492 | coding | upstream | 129072 | 37077027 ~ 37090104 (-) |
| LOC110496131 | borea | coding | upstream | 790886 | 37738841 ~ 37744121 (-) |
| LOC110496132 | LOC106588485 | coding | upstream | 807062 | 37755017 ~ 37757210 (-) |
| G1544372 | NA | non-coding | downstream | 1852 | 36945536 ~ 36945874 (-) |
| G1544326 | NA | non-coding | downstream | 8637 | 36880668 ~ 36939089 (-) |
| G1544320 | NA | non-coding | downstream | 73934 | 36873524 ~ 36873792 (-) |
| G1544318 | NA | non-coding | downstream | 75468 | 36872029 ~ 36872258 (-) |
| G1544317 | NA | non-coding | downstream | 76052 | 36871429 ~ 36871674 (-) |
| G1544378 | NA | non-coding | upstream | 1631 | 36949586 ~ 36949833 (-) |
| G1544403 | NA | non-coding | upstream | 17018 | 36964973 ~ 36965232 (-) |
| G1544405 | NA | non-coding | upstream | 17722 | 36965677 ~ 36966001 (-) |
| G1544592 | NA | non-coding | upstream | 20268 | 36968223 ~ 36968644 (-) |
| G1544600 | NA | non-coding | upstream | 70175 | 37018130 ~ 37022860 (-) |
| G1543346 | LOC106588513 | other | downstream | 935040 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 1443569 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 1450744 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 1598064 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 1767698 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 353553 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 974200 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 1199635 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 1217295 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 1611694 | 38557052 ~ 38563365 (-) |
