G1544796



Basic Information


Item Value
gene id G1544796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 37297223 ~ 37297532 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1767711
gcgaTTAAATTATTTTCGttttgacctttaatcccagaaaaagggccataactcaaaaaccgttgaggcctcgacgccatcttgttcggggccaactgcccattatgccaaacctatgctcaccaagtttcgtcttcaaagtcttttccgtttaggagaaaaggccacgtcgtgattggtgatgttttgtacttttgcaatatgattccattcgccctcttgtgggatttacAGGGACAGcggaaaaataacaaaaatgtgaacattttataaaacggaaaccgaatgtccgagagacTTCGTTTCATGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1767711 True 310 lncRNA 0.42 1 37297223 37297532

Neighbor


gene id symbol gene type direction distance location
prdm1b LOC106588492 coding downstream 207121 37077027 ~ 37090104 (-)
LOC110496124 LOC106588493 coding downstream 240474 36990241 ~ 37056749 (-)
zgc:101785 LOC106588494 coding downstream 307546 36974996 ~ 36989677 (-)
zgc:114119 LOC106588497 coding downstream 357575 36931300 ~ 36939648 (-)
LOC110496120 LOC106588498 coding downstream 462163 36823864 ~ 36835060 (-)
LOC110496131 borea coding upstream 441309 37738841 ~ 37744121 (-)
LOC110496132 LOC106588485 coding upstream 457485 37755017 ~ 37757210 (-)
LOC110496134 LOC106511154 coding upstream 461256 37758788 ~ 37796944 (-)
LOC118941234 NA coding upstream 483837 37781369 ~ 37781447 (-)
LOC110496137 LOC106570035 coding upstream 546504 37844036 ~ 37854732 (-)
G1544764 NA non-coding downstream 29669 37267150 ~ 37267554 (-)
G1544758 NA non-coding downstream 33363 37263442 ~ 37263860 (-)
G1544600 NA non-coding downstream 274363 37018130 ~ 37022860 (-)
G1544592 NA non-coding downstream 328579 36968223 ~ 36968644 (-)
G1544799 NA non-coding upstream 510 37298042 ~ 37298308 (-)
G1544814 NA non-coding upstream 10706 37308238 ~ 37308443 (-)
G1544815 NA non-coding upstream 11017 37308549 ~ 37311042 (-)
G1544828 NA non-coding upstream 25766 37323298 ~ 37323503 (-)
G1544839 NA non-coding upstream 33537 37331069 ~ 37331287 (-)
G1543346 LOC106588513 other downstream 1284537 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 1793066 35452618 ~ 35504157 (-)
LOC118941140 NA other downstream 1800241 35492995 ~ 35499681 (-)
LOC110496085 NA other downstream 1947561 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 2117195 35151351 ~ 35203984 (-)
G1544806 NA other upstream 3976 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 624623 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 850058 38121576 ~ 38152320 (-)
G1546053 NA other upstream 867718 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 1262117 38557052 ~ 38563365 (-)

Expression



Co-expression Network