Gene
RNA
| Item | Value |
|---|---|
| gene id | G1544796 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 37297223 ~ 37297532 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1767711 | True | 310 | lncRNA | 0.42 | 1 | 37297223 | 37297532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prdm1b | LOC106588492 | coding | downstream | 207121 | 37077027 ~ 37090104 (-) |
| LOC110496124 | LOC106588493 | coding | downstream | 240474 | 36990241 ~ 37056749 (-) |
| zgc:101785 | LOC106588494 | coding | downstream | 307546 | 36974996 ~ 36989677 (-) |
| zgc:114119 | LOC106588497 | coding | downstream | 357575 | 36931300 ~ 36939648 (-) |
| LOC110496120 | LOC106588498 | coding | downstream | 462163 | 36823864 ~ 36835060 (-) |
| LOC110496131 | borea | coding | upstream | 441309 | 37738841 ~ 37744121 (-) |
| LOC110496132 | LOC106588485 | coding | upstream | 457485 | 37755017 ~ 37757210 (-) |
| LOC110496134 | LOC106511154 | coding | upstream | 461256 | 37758788 ~ 37796944 (-) |
| LOC118941234 | NA | coding | upstream | 483837 | 37781369 ~ 37781447 (-) |
| LOC110496137 | LOC106570035 | coding | upstream | 546504 | 37844036 ~ 37854732 (-) |
| G1544764 | NA | non-coding | downstream | 29669 | 37267150 ~ 37267554 (-) |
| G1544758 | NA | non-coding | downstream | 33363 | 37263442 ~ 37263860 (-) |
| G1544600 | NA | non-coding | downstream | 274363 | 37018130 ~ 37022860 (-) |
| G1544592 | NA | non-coding | downstream | 328579 | 36968223 ~ 36968644 (-) |
| G1544799 | NA | non-coding | upstream | 510 | 37298042 ~ 37298308 (-) |
| G1544814 | NA | non-coding | upstream | 10706 | 37308238 ~ 37308443 (-) |
| G1544815 | NA | non-coding | upstream | 11017 | 37308549 ~ 37311042 (-) |
| G1544828 | NA | non-coding | upstream | 25766 | 37323298 ~ 37323503 (-) |
| G1544839 | NA | non-coding | upstream | 33537 | 37331069 ~ 37331287 (-) |
| G1543346 | LOC106588513 | other | downstream | 1284537 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 1793066 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 1800241 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 1947561 | 35346895 ~ 35351655 (-) |
| LOC110496081 | LOC106588241 | other | downstream | 2117195 | 35151351 ~ 35203984 (-) |
| G1544806 | NA | other | upstream | 3976 | 37301508 ~ 37302174 (-) |
| ppt1 | LOC106588481 | other | upstream | 624623 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 850058 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 867718 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 1262117 | 38557052 ~ 38563365 (-) |
